Gene Svir_04770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04770 
SymbolguaA 
ID8385815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp469455 
End bp470999 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content68% 
IMG OID644974575 
ProductGMP synthase 
Protein accessionYP_003132379 
Protein GI257054547 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGACG GTCCCGTGCT CGTGGTGGAC TACGGCGCAC AGTACGCGCA GCTCATCGCT 
CGCCGAGTGC GCGAGGCGCA GGTGTACTCG GAGGTCGTGC CCCATACGAC CCCCGTCGCC
GAGATCCTCG AGCGTGACCC GGCCGCCATC ATCCTGTCGG GCGGTCCGGC GAGCGTGTAC
GCCGACGGTG CCCCCGGAGT GGACCCCGTC CTGTTCGACG CGGGAGTGCC GGTGTTCGGC
ATCTGCTACG GCTTCCAGGT CATGGCGAAA GCGCTCGGTG GCACGGTGGA GCACACGGGC
ACCCGGGAAT TCGGACGGAC CGAACTGGAG GTCGTCGGGG GAACGCTGCA TGAGGGGCTG
CCCACGCGGC ACCCGGTGTG GATGAGTCAC GGTGACTGCG TGACGGAGGC GCCCGAAGGG
TTCGAGGTCA CGGCGAGCAG TGACGGTGCT CCGGTGGCCG GATTCGAGAA CCTCGAACGC
AGGCTCGCCG GAGTGCAGTA CCACCCGGAG GTGGCGCATT CACCCCACGG GCAGGAGGTG
TTGCGGCGGT TCCTGCACGA CATCGCGGGG GTGCGGCCGA ACTGGACCAC GGCGTCGATC
GTGGACGAGC AGGTGGAGCG CATCCGCGCT CAGATCGGCG ACGGACACGC CATCTGCGGT
TTGTCCGGTG GGGTGGACTC GGCTGTGGCC GCGGCGCTCG TCCAACGCGC CATCGGTGAC
CGTCTCACCT GTGTGTTCGT GGATCACGGC CTGTTGCGGG CCGGGGAGCG GGCGCAGGTG
GAACGTGACT TCGTGGCCGC CACCGGGGTG AAGCTGGTCA CGGTGGACGC CAGTGAGCGG
TTCCTGTCTG CGTTGGCCGG GGTCACCGAC CCCGAACAGA AGCGCAAGAT CATCGGTCGG
GAGTTCATCC GCGTCTTCGA GCAGGCCGCA CGTGACGTCA AGGCGGCGGG GGACGTCGAG
TTCCTCGTGC AGGGCACGTT GTACCCCGAC GTGGTGGAGT CCGGCGGGGG TGCCGGCACG
TCCAACATCA AAAGCCACCA CAACGTGGGC GGTCTGCCGG ACGACCTCCA GTTCACGCTG
GTGGAGCCGT TGCGGATGCT GTTCAAGGAC GAGGTTCGTC GGGTGGGCCT CGAACTCGGC
CTTCCCGAGA CCATCGTGCA CCGGCAACCG TTCCCGGGAC CGGGACTGGG CATCCGCATC
ATCGGCGAGG TGACCGCCGA ACGGCTGGAG ATCCTCCGCG CGGCCGACGC CATCGCTCGC
GAGGAGATGA GTGCCGCCGA GCTGGACTCG GACATCTGGC AGTGCCCCGT CGTGCTCCTG
GCCAACGTCC GCAGCGTCGG CGTGCAGGGC GACAGCCGTA CGTACGGACA CCCTGTGGTG
CTGCGCCCAG TTTCCAGTGA AGACGCCATG ACCGCCGATT GGGCTCGGTT ACCCTACGAC
GTGCTCGAAC GGATCTCCAC GCGGATCACC AACGAGGTGG CCGATGTGAA CCGGGTCGTG
TTGGACGTGA CCAGCAAGCC GCCCGGCACG ATCGAGTGGG AGTGA
 
Protein sequence
MADGPVLVVD YGAQYAQLIA RRVREAQVYS EVVPHTTPVA EILERDPAAI ILSGGPASVY 
ADGAPGVDPV LFDAGVPVFG ICYGFQVMAK ALGGTVEHTG TREFGRTELE VVGGTLHEGL
PTRHPVWMSH GDCVTEAPEG FEVTASSDGA PVAGFENLER RLAGVQYHPE VAHSPHGQEV
LRRFLHDIAG VRPNWTTASI VDEQVERIRA QIGDGHAICG LSGGVDSAVA AALVQRAIGD
RLTCVFVDHG LLRAGERAQV ERDFVAATGV KLVTVDASER FLSALAGVTD PEQKRKIIGR
EFIRVFEQAA RDVKAAGDVE FLVQGTLYPD VVESGGGAGT SNIKSHHNVG GLPDDLQFTL
VEPLRMLFKD EVRRVGLELG LPETIVHRQP FPGPGLGIRI IGEVTAERLE ILRAADAIAR
EEMSAAELDS DIWQCPVVLL ANVRSVGVQG DSRTYGHPVV LRPVSSEDAM TADWARLPYD
VLERISTRIT NEVADVNRVV LDVTSKPPGT IEWE