Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_04590 |
Symbol | |
ID | 8385797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 451489 |
End bp | 452625 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644974557 |
Product | alanine racemase |
Protein accession | YP_003132361 |
Protein GI | 257054529 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.379563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGAA TGTCATTGCC TCGTGCTGAG GTCGTGGTGG ATCTGGAGGC CATTCGCCAC AACGTGCGGT TGCTCGCCTC CCGGGCGGCC GCGTCCGGAG CGGAGACGAT GGCCGTCGTG AAGGCCGACG GTTACGGCCA CGGTGCCGTG CCGGTCGCTC GGGCCGCCGT CGAGGCCGGT GCGACGTGGT TGGGCGTGGC TTCGTTGGAC GAAGCGCTCG CTCTGCGGAA CGCCGGCCTC ACGACTCGAC TGATGAGCTG GCTCGACACC CCGGACGTGG ATTTCGCGCC GGCCGTGGAA CGGGACATCG ACGTTTCGGT CAGCTCCACC GGCGAGTTGG CGCGAGCGGT GGACGCGGCC GCGAGGGTGG GTCGTCGCGC CCGGGTGCAC CTGAAGATCG ACACCGGTCT GTCGCGGAAC GGTTGTCCCG CTGAACTGTG GCCCACCCTG GTGAAGGCCG CCGCGGCGGA GGACGGGGTC GAGGTCGTGG GCATGTGGTC ACACCTGGCC TGTGCCGACG AACCCGGCCA CCCGGCCACC GAAGCCCAGG CCGAGCGGTT CGCCGCCGCC TACGCGGTAG CGCGGGAGGC GGGGTTGTCA CCGCTGCGGC ACCTGGCCAA CTCCGCGGCC ACGTTGACCC GGCCCGACCT GCACTTCGAC CTCGTGCGGC CCGGTATCGC CGTCTACGGC CTCAACCCCG TGTCCCAGCC CGAGGACCTG CGGCCCGCGA TGACGTTCCG GTCGAGTGTC GTGCTCACCA AACGCATCAG GGCGGGTGAG TCCGTGTCCT ACGGGCAGAC ATGGACGGCG AGTGCCGATA CCACGGTGGC GCTCGTGCCC GTGGGGTACG CCGATGGTGT TCCACGCACG TTGTCGGGGC GGCTGAGCGT GTGGTTGAAC GGCACGCGGC GCCCCGTGGT CGGGCGGGTG TGCATGGACC AGCTCGTCGT CGACTGTGGT GACGACGAAC CCGAGCTCGG CGCCGAGGTC GTGCTGTTCG GTACGGGTGA GGGTGGGATG CCGACGGCCA CCGAGTGGGC CGAGAAGATC GGCACCATCG ACTACGAGAT CGTCACCGGC ATGTACCGGC CGCGGGTCCG TCGGCGTTAC GTCGGAACGG AGCGAGACCG TTCGTGA
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Protein sequence | MSGMSLPRAE VVVDLEAIRH NVRLLASRAA ASGAETMAVV KADGYGHGAV PVARAAVEAG ATWLGVASLD EALALRNAGL TTRLMSWLDT PDVDFAPAVE RDIDVSVSST GELARAVDAA ARVGRRARVH LKIDTGLSRN GCPAELWPTL VKAAAAEDGV EVVGMWSHLA CADEPGHPAT EAQAERFAAA YAVAREAGLS PLRHLANSAA TLTRPDLHFD LVRPGIAVYG LNPVSQPEDL RPAMTFRSSV VLTKRIRAGE SVSYGQTWTA SADTTVALVP VGYADGVPRT LSGRLSVWLN GTRRPVVGRV CMDQLVVDCG DDEPELGAEV VLFGTGEGGM PTATEWAEKI GTIDYEIVTG MYRPRVRRRY VGTERDRS
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