| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_04290 |
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| Symbol | |
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| ID | 8385767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 415464 |
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| End bp | 416366 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644974528 |
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| Product | pseudouridylate synthase I |
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| Protein accession | YP_003132332 |
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| Protein GI | 257054500 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.477492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGGACG GGCCCGCTAC TTCCAACGGG GAGGGCGGGC CCGTTCGTCT CCGCATCGAC
CTGAGTTACG ACGGCACGGA CTTCTCAGGA TGGGCGCGCC AGCCGGGACG TCGCACGGTT
CAAGGCGTGC TTGAGGATGC CCTGGCCAAG CAGCCCCCAG GAGCCTCGAT AGCCGGCCCA
GTAGTGGTAG CAGGCCGTAC CGACGCAGGT GTCCACGCGA TCGGCCAAGT CGTTCACGTG
GACGTGACGC GTTTAGCGGG CGAAACGCGT TCCCGGATGC CGATTTCATC GGATGGGCTC
CCGGACCTTG ATTGGGCACG TTACCGCTTG AACCGCGTTT TGCCGGCAGA TGTGCGTGTC
CTCAGCATTC GCCGGGCCCC TGCGGGATTC GATGCGCGCT TTTCGGCTGT CAAACGTCAT
TACCGGTATC AGGTGTCGGA TGCCCCTTGG GGAGTCAGCC CGCTGCGGAG GCGGGACACA
TTGGCTTGGC CGCGGCCTTT GTCTGTTGAC GCGATGAACG AGGCAGCATC CTCGCTATTG
GGGCTGCACG ATTTCGCTGC GTTCTGCAAG CGACGAGAGG GAGCCACCAC CATTCGTGAG
CTCATGGAGC TCCGATGGTG CCGCGTAGAC GAATATGAAC TGCACCTTTC TGTGTCCGCA
GATGCGTTCT GCCATTCGAT GGTGCGTAGC CTGGTCGGTG CTCTCCTTTG GGTCGGCGAT
GGTCGGCGTG ATGTCGGTTG GCCGTTGGAA GTCCTGCGAA GCCGACAACG AAGCAGTGTT
GTCGCGCCCG CGCACGGATT GACTTTGGTC AAAGTCGACT ACCCGCCGGA CGACGAGCTC
GCGTCACGTG CGGAGAAGAC GCGCAACATC CGTGACGAGT CCGAATCCTT CCAAAGTGAC
TGA
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| Protein sequence | MQDGPATSNG EGGPVRLRID LSYDGTDFSG WARQPGRRTV QGVLEDALAK QPPGASIAGP
VVVAGRTDAG VHAIGQVVHV DVTRLAGETR SRMPISSDGL PDLDWARYRL NRVLPADVRV
LSIRRAPAGF DARFSAVKRH YRYQVSDAPW GVSPLRRRDT LAWPRPLSVD AMNEAASSLL
GLHDFAAFCK RREGATTIRE LMELRWCRVD EYELHLSVSA DAFCHSMVRS LVGALLWVGD
GRRDVGWPLE VLRSRQRSSV VAPAHGLTLV KVDYPPDDEL ASRAEKTRNI RDESESFQSD
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