| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_02250 |
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| Symbol | |
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| ID | 8385563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 225966 |
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| End bp | 228941 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644974326 |
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| Product | nitrate/nitrite-sensing histidine kinase with HAMP domain protein |
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| Protein accession | YP_003132134 |
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| Protein GI | 257054302 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGCCA TCGCCTTCAT CCCGAGCCTC GTCTTCCTGC TGACCGGTGT CGCGATGGCC
GGATACCTCA TCTACGACGC CATCCAGGTG CGGTCCTTCA CCACGAAGGT TCACAACGCC
GCCGAGCCCG CGGGCGTGCT GTTCGCCAGT CTGCGCGAGG AACGCAGGCT GACGCTGCAG
GAACTCGCGA CCACCCGTTC GCTCCGCGCG GAGCTGGACC AGCAGCGCCG TCAGACCGAT
GAAGCGGCTC GACGCATGGC CGCCGACCTC GAGAGCATCG CCGAGGACGC GCCCGCCAAC
GTGCGGGAGA GCACCCGAGA CGCGCAGCGG CGGCTGCAGC AGCTCGCCGA ACTCCGACAG
CGCGTCGACA ACGGTGACAC GTCACTGCAA GAGGCGTACG ACTTCTACAA CGGGATCATC
GACACCTACA CGGTCGGGCT GAACGGCGTG GCGCAGGAGA CGCCGAACGC CGAGACCGCC
TACAAACGCA TGGTGGCCAT GCCGCTGTTC GTCAGCGCGG ACAGCATGTC CCGCGGCTAT
GCCCTGGCGG CGGCGGGTAT CGAGAGCGGT GGACTGACCG AACAGGAGTT CCGCACCTAC
ATCGGTCAGA TCGGTACCTA CCACAGCACG CTGGAACAGG CCGTCCCGGA CATGGTCCCC
TCCGTCCGGG AGAAGTACGA ACAGCTCGTG GCCAGCGACG CGTGGGAGAC GTTGACCCGC
GTCGAGAACG CGTTCCTCCG AGGCAACACC ACCGAACTGC CCGTGCCCGA ACCGGCGTGG
CATGCGGCCG CCGCCGAGGT CAGCGGGGCG TTGTGGAACC TCTACGTGGA ACAGAGCACC
GTGGCCACCG AGCTGGCCCT CGACGAGGCC GAGGCGACGC TGACCACGTC GATCGTGGCG
GGTACGGGTG TGATCGCCGT GGCACTGGCG GTGTCGCTGT TGGCCTGGCG GATGTCCGAC
CGGCTCGCCA AGCGCCTGGT GTCGCTGCGG GAGGCCACGC TCGAGGTCGC CGACGAACGC
ATGCCCCGCA TCATCGAGCG ACTCCGCGAC GGGGAGCAGG TGGACCTCGA AAGTGAGGTG
TCCTACCTCG ACCACGGTGA CGACGAGATC GGCGAGGTCG CCGAGGCGTT CAACAAGGCA
CAGCGCACGG CCATCGCCGC CGCGGTCGAC GAGGCCAAGA CCAGGGAGGG TACCCGGAAG
GTCTTCCTCA ACATCGCTCA CCGCAGCCAG GTGATCGTGC ACCGGCAGCT GGCGGTGTTG
GACGCCGCCG AACGCAAGCA GGAGGACCCG GACCAACTCG ACCTGCTGTT CCGCCTCGAC
CACCTGTCCA CACGGGCGCG TCGCAACGCC GAGAACCTGA TCATCCTCGG TGGGGAGCAG
CCGGGGCGGC AGTTCCGCAA GCCGGTGCCC CTCATCGACA TCGTGCGAGG CGCGATCGCC
GAGACCGAGG ACTACAAGCG CGTCAGCACC AACAGGTTGC CGGACATCGC CGTCGTGGGT
CCGGTCGTCA GCGACCTCGT GCACCTGCTG GCCGAGCTGC TCGACAACGC CACGTCGTTC
TCGCCTCCGC AGTCGCGTGT CGAGGTGCGC GGTGAGCTCG TGGGCCGTGG CGTGGTCATC
GAGATCGAGG ACCAGGGCAT CGGCATGGAG GCCGATGAGC TCGACCGGTT CAACCGGATG
CTGCGCAACC CGCCGGACTT CGGCTTCATG GCACTGACCG AGGAGTCCCG GCTGGGGCTG
TTCGTGGTCG CCAGGTTGGC GGCCAAGCAC CACCTCACGG TGACCCTGCG GGAATCGGCC
TACGGCGGCA CACGGGCGAT CGTCCTGGTG CGCACCGAAC TGCTCAGCGA GATCCCCACC
GAGATCGAGG GCGAGAGTGC CTCCGGTGTC GAGGAGACGG CCACACTCAC GACGTCGCTC
CCGGCGAGCG GCGGTGTTCG GCCCGTTCCC CGCAGGCAGC CGAAGGCCCT GCCGTCCCGT
GCCGGTGACA GTGCCGGTGA CAGTGCTGGT GACAGTGCCG GTGACAACGA CGGGCAGCCC
ACCGACACGT CCACCGCGAC CGGGATCTCG TCCGGGGCGC TCTCCCCGGG CGAGGGGGTC
GATACGCCGA CCACGCAGTA CACCCCGCGC TCGTCGTCCG AACCCGCGGA GGAACGCAGG
GGACTGCCTC CCGGCGGCGG GAAGGGCCGC GCTGACTCGT CGAATTCGGT GCGTCCCGAA
CTGCCGCGTC GTGAGCGGCG GAGGAAACAC GAGGAGTCGT CACAGTACGA CGGTGGATAC
GACCCCGGCG TCGCCGCCGT GCGGGGACGG CTGCTCGGGA ACACCGCGGA CACCGCGGAT
GCCGCGGATG CCGTGGACGC CGCGGAGGTC ACGAAGATCA CGGGCAGCGT GAACACCGCC
GACCTCGACG TCCTCGGGGA CACCGGAAAC GCTGCGAGCA CCGCGGACGG CACGGACGTT
GCACGGGGAC AGCGGCAGGC CGAACCGAGC TCGGACAGGC CCGGGAAACA CGCCGATGAC
GGTGACCGGC CCACGGTGGG GGAGCTGTTC GAAACGATGT CGGAAGCGGA ACTGTCGGGG
GAGTCGTGGT CCGTGCCCAC ACAGCATGTG CCGCGGTTGC CGAGGGAACT GCCGAGGGCT
CCGCGCCCGA ACTTCGGCTC CCGGCCCCGC CACGAGGCCC GGCCCGCCCA GGAACAGCCA
CTTCAGCGGA GTTGGCCGGA TAATGGGCCT TCGACGCCCG CCCCATCGAG CGGGACGAAT
GCGCTCAACG GGGAACGGCC GCCGTTGCCC CGGCGACGGC GGCAGCAGAA CCTGGCACCG
CAGTTGAGGG AGGAGACCAC TTCCACCGAC CTGACCGGTG GCGACGACGA GTACACCACC
ACACCGGAGC AGGCTCGCAG CAGGCTTTCG GCATTCCAAC AGGGAACCCG CCGAGCCCGA
CAGCACCACA TCGGCAGCGA CGATTCTGGA GACTGA
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| Protein sequence | MLAIAFIPSL VFLLTGVAMA GYLIYDAIQV RSFTTKVHNA AEPAGVLFAS LREERRLTLQ
ELATTRSLRA ELDQQRRQTD EAARRMAADL ESIAEDAPAN VRESTRDAQR RLQQLAELRQ
RVDNGDTSLQ EAYDFYNGII DTYTVGLNGV AQETPNAETA YKRMVAMPLF VSADSMSRGY
ALAAAGIESG GLTEQEFRTY IGQIGTYHST LEQAVPDMVP SVREKYEQLV ASDAWETLTR
VENAFLRGNT TELPVPEPAW HAAAAEVSGA LWNLYVEQST VATELALDEA EATLTTSIVA
GTGVIAVALA VSLLAWRMSD RLAKRLVSLR EATLEVADER MPRIIERLRD GEQVDLESEV
SYLDHGDDEI GEVAEAFNKA QRTAIAAAVD EAKTREGTRK VFLNIAHRSQ VIVHRQLAVL
DAAERKQEDP DQLDLLFRLD HLSTRARRNA ENLIILGGEQ PGRQFRKPVP LIDIVRGAIA
ETEDYKRVST NRLPDIAVVG PVVSDLVHLL AELLDNATSF SPPQSRVEVR GELVGRGVVI
EIEDQGIGME ADELDRFNRM LRNPPDFGFM ALTEESRLGL FVVARLAAKH HLTVTLRESA
YGGTRAIVLV RTELLSEIPT EIEGESASGV EETATLTTSL PASGGVRPVP RRQPKALPSR
AGDSAGDSAG DSAGDNDGQP TDTSTATGIS SGALSPGEGV DTPTTQYTPR SSSEPAEERR
GLPPGGGKGR ADSSNSVRPE LPRRERRRKH EESSQYDGGY DPGVAAVRGR LLGNTADTAD
AADAVDAAEV TKITGSVNTA DLDVLGDTGN AASTADGTDV ARGQRQAEPS SDRPGKHADD
GDRPTVGELF ETMSEAELSG ESWSVPTQHV PRLPRELPRA PRPNFGSRPR HEARPAQEQP
LQRSWPDNGP STPAPSSGTN ALNGERPPLP RRRRQQNLAP QLREETTSTD LTGGDDEYTT
TPEQARSRLS AFQQGTRRAR QHHIGSDDSG D
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