Gene Svir_02150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02150 
Symbol 
ID8385553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp217633 
End bp218310 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content69% 
IMG OID644974316 
Producthypothetical protein 
Protein accessionYP_003132124 
Protein GI257054292 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGAC GGGCCCTGGC CACGCTGCCT CACCGGGTGT ACGACGACGC GCTCACGCTG 
TGGGACTACC ACGTGCTGCG ACACGCACCG CGACGTAGCG ACGTGGGCAT CGGCCTGGGC
AGCCACGACC TGGGCGTGGC CGAACACGCC GCCACGCTGT TCCACGAGGG CCGTTTCGAA
CTCCTGGTGT TCACAGGGGC CACCACAGCC ACCACGGCCC GACTCTTCCC CCGGGGTGAG
GCCGCGCACT ACCGCGAACG GGCGTTGGAA CTGGGGGTCC CCGACGACGC GGTGCTGGTC
GAACCGCACG CCCGCAACAC CGGCGAGAAC ATCCGGTTCA CCCGACGGCT ACTGGCCGAC
TCGGGGATCA CGGTGCGTAC GGCGACGTTG GTGTGCAAGC CGTATCACCA GCGGAGGGCC
TACGCCACCA CGCGCAAGCA GTGGCCGGAG CTGGACGTCC ACTGCTCGGC GGAGCGGATC
ACGCTGGATG AGTACATGGA CGCTATCGGT GACGCCGATC GGGTCGTCCA CATGCTCGTC
GGGGAGACCC AGCGCATCCT CGTCTACGCC CGGCGCGGAT TCACGATCGC CCAGGAAGTC
CCCGCGGAGG TCGACGCCGC CTATCGGCGG TTGGTGAGCG CGGGATACGT GTCCCGTCTG
GTGCAAGAGG GGCTGTGA
 
Protein sequence
MTRRALATLP HRVYDDALTL WDYHVLRHAP RRSDVGIGLG SHDLGVAEHA ATLFHEGRFE 
LLVFTGATTA TTARLFPRGE AAHYRERALE LGVPDDAVLV EPHARNTGEN IRFTRRLLAD
SGITVRTATL VCKPYHQRRA YATTRKQWPE LDVHCSAERI TLDEYMDAIG DADRVVHMLV
GETQRILVYA RRGFTIAQEV PAEVDAAYRR LVSAGYVSRL VQEGL