Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_02150 |
Symbol | |
ID | 8385553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 217633 |
End bp | 218310 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644974316 |
Product | hypothetical protein |
Protein accession | YP_003132124 |
Protein GI | 257054292 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGAC GGGCCCTGGC CACGCTGCCT CACCGGGTGT ACGACGACGC GCTCACGCTG TGGGACTACC ACGTGCTGCG ACACGCACCG CGACGTAGCG ACGTGGGCAT CGGCCTGGGC AGCCACGACC TGGGCGTGGC CGAACACGCC GCCACGCTGT TCCACGAGGG CCGTTTCGAA CTCCTGGTGT TCACAGGGGC CACCACAGCC ACCACGGCCC GACTCTTCCC CCGGGGTGAG GCCGCGCACT ACCGCGAACG GGCGTTGGAA CTGGGGGTCC CCGACGACGC GGTGCTGGTC GAACCGCACG CCCGCAACAC CGGCGAGAAC ATCCGGTTCA CCCGACGGCT ACTGGCCGAC TCGGGGATCA CGGTGCGTAC GGCGACGTTG GTGTGCAAGC CGTATCACCA GCGGAGGGCC TACGCCACCA CGCGCAAGCA GTGGCCGGAG CTGGACGTCC ACTGCTCGGC GGAGCGGATC ACGCTGGATG AGTACATGGA CGCTATCGGT GACGCCGATC GGGTCGTCCA CATGCTCGTC GGGGAGACCC AGCGCATCCT CGTCTACGCC CGGCGCGGAT TCACGATCGC CCAGGAAGTC CCCGCGGAGG TCGACGCCGC CTATCGGCGG TTGGTGAGCG CGGGATACGT GTCCCGTCTG GTGCAAGAGG GGCTGTGA
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Protein sequence | MTRRALATLP HRVYDDALTL WDYHVLRHAP RRSDVGIGLG SHDLGVAEHA ATLFHEGRFE LLVFTGATTA TTARLFPRGE AAHYRERALE LGVPDDAVLV EPHARNTGEN IRFTRRLLAD SGITVRTATL VCKPYHQRRA YATTRKQWPE LDVHCSAERI TLDEYMDAIG DADRVVHMLV GETQRILVYA RRGFTIAQEV PAEVDAAYRR LVSAGYVSRL VQEGL
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