Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01940 |
Symbol | |
ID | 8385532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 200158 |
End bp | 201240 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644974296 |
Product | hypothetical protein |
Protein accession | YP_003132104 |
Protein GI | 257054272 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.705916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGACCCCA AGACGATTCG GCGGTGGGAA AGCGGCGAGA CCGAAGAGGG GCCACAACCT TGGTTACGGC CGAAACTGGC GCAGTGCCTG CAGGTGTCAC CGGAACAGCT CGAGGAGCTA CTGGCAGGTG ACGACGAGCC GGCGACCAAT GACCGCGTCG ACTACTCGCT GCGGAACCCA GCAGCCGCGG ACCTTCGGAC CGTAGCCGAC CTCAGAGACG AGGTACACGA CCTCGACAAG CGTTACGACA GCGCGCCGTC AACGTCGCTG CTCGCACGCA CAGGACACTG TCTCGGCCAG GTCGCGTTTC TGCGCGCCAA CGCGTCGAAC CACCGGGTTC GACACGAGCT CCTCGCCGTC GAGACCGAGG CCGCCACGCT CATGGGACAA CTCGTCTGGG ACGCGTCCCA GCGCCGGGAC CACGCGACCG CACACGACTA CTTCGACCAG GCGATCTCGG CCGCGCAGCG GCTTCGGGAC CCGACAGCGG AAGGCCGCGC GCTCCTACGG AAGAGCTTCG TGGCGCTCTA CGGCGAAAGA GCTCCTGAGA CCGGGCTCCA GCTCACCATG CGCACAACCG AGGTGGTAGC GGGGAGCAGC CACGTGCTTG CGGGACTCGC GCTGCTGCAC ACAGCGGAGG CCTACGCGAT GCTCGGCCGT CAACGCGACT GCGAACGGGC GCTCAGGGAC GCTGACTCCC GGATTGAGCG GATCGGCGAG GCCGACGCGG CGCTCAACCT GTTCTCCCCA ACACAGCCGG GGAGACTCGC CGGATCTTGC TACCTCTTCC TCGGCAAGCC GAAACTCGCT CAGCCGATCC TGGAAACGAC CGCTCACCAG CTCCGCGACC GCTCGAAGTC CCAGGCCATC GTCCTCGGCA ACCTTGCTCT CGCGTACCTC CGGCAACGCC GCCTCGATGA GGCGGTGGGT GCGTTGCATC GGGCCGTGGA TGTCGTCGAG GCAACGCGGG GCGGAGGCGG GTTGAACATC GTCTTCAGTG CTTGCCGGGA ACTCCGACCA TGGCGGAACG TGGACCTGGT GCAGGACGTG TACGACCGGG TGATGACCCT GATGACGGCG TGA
|
Protein sequence | MDPKTIRRWE SGETEEGPQP WLRPKLAQCL QVSPEQLEEL LAGDDEPATN DRVDYSLRNP AAADLRTVAD LRDEVHDLDK RYDSAPSTSL LARTGHCLGQ VAFLRANASN HRVRHELLAV ETEAATLMGQ LVWDASQRRD HATAHDYFDQ AISAAQRLRD PTAEGRALLR KSFVALYGER APETGLQLTM RTTEVVAGSS HVLAGLALLH TAEAYAMLGR QRDCERALRD ADSRIERIGE ADAALNLFSP TQPGRLAGSC YLFLGKPKLA QPILETTAHQ LRDRSKSQAI VLGNLALAYL RQRRLDEAVG ALHRAVDVVE ATRGGGGLNI VFSACRELRP WRNVDLVQDV YDRVMTLMTA
|
| |