Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01690 |
Symbol | |
ID | 8385507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 178807 |
End bp | 179547 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644974273 |
Product | predicted Zn peptidase |
Protein accession | YP_003132083 |
Protein GI | 257054251 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.224928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCTGC GGCGAGGTTT CAAGGCGACC GCCAGACGAC TCGCAGCGGA CGTGCGTGAC GAATTGGGCA TCGCCGCCTT CGAACCACTC GACCCCTACG CCCTCGCACG CCTCTACGGC GTCGAGGTGT TCACCCTCGA TGCGCCCTGG CTACCCCGGG ACGCCGTCGA ACACTTCACC GGCACCGCCG CCGAGTCGTT CTCCGGAGCA CTGATCCAGA TCGGAACCGG ATGCGTGATC GTCGAGAACC ACACGCACAC CGACACCCGT CGCCGTTCCA CCGTGGCACA CGAGATGGCC CACGTACTGC TGGAACACGA ATTCGGGGTG CTGGTCACCG GTGGCACCCC GTGCCGCTCC ACCACGACGG AGATCGAACA GGAGGCGGCG GAACTGTCCG GCGAACTGCT GCTGCCCCGT GACGCCGCGA GGACGGCCGC CTTCCGCGGT TGGACCGACA CCACCATCGC ACGCTATTTC CGGGTCAGCG AACGCATGGC GCGATGGCGG ATGAACGTCA CCGGAGCCCG GCGTATCGCG CGGCGGACCC GGGACAGGCG GGCGCACGGC GCCGCCGAGC GGTCGGTGCC CGATGTCACC GTCCGGAATC CGACCACCGA GGCGACCAGC GCCCGACACA CATCAAAATT TCCACAGTGG ACTAGATTGG ATCATGCCCC AGGGCCACCG AATCGATTAT CCAAAGTAGC CAGATCATCC GACGACTCGA TAGGACCGTG A
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Protein sequence | MALRRGFKAT ARRLAADVRD ELGIAAFEPL DPYALARLYG VEVFTLDAPW LPRDAVEHFT GTAAESFSGA LIQIGTGCVI VENHTHTDTR RRSTVAHEMA HVLLEHEFGV LVTGGTPCRS TTTEIEQEAA ELSGELLLPR DAARTAAFRG WTDTTIARYF RVSERMARWR MNVTGARRIA RRTRDRRAHG AAERSVPDVT VRNPTTEATS ARHTSKFPQW TRLDHAPGPP NRLSKVARSS DDSIGP
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