Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01030 |
Symbol | |
ID | 8385441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 103796 |
End bp | 104650 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644974207 |
Product | hypothetical protein |
Protein accession | YP_003132018 |
Protein GI | 257054186 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.331625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACTCC CGCCCCCCGG CCCTCGTGGA ATCCCAACCC TGCTCGCCAG GCTTGTCGAC GACTCGGCCC TGTTCCCGCC GGGCGAAGCG GCAATGCCTG ATGCGCTGGC CAGTTACCTG GAACACAGGT CGGGTGAGTA CGCCGGAGTG CAGGGCGTCT TCCTGTGTCC GGCGTCCCGG CTGGCGGAGA TGATCACTGA GCTCATCAAG ATCCGGCCGA AGGAACCGCT GCCGCTGTCG TTGATCATCG ACACGGGGCT CGGCGGCGTA CCGAAGGCCA TCTCCATCGT CGAATCGCGC GAGGAGCTGC TGTCGCTGCG GATGGTGGAG ATGCCCGCAC CCTCCGACGT CGACGAGGTC TGGTTGGAAC GAGTGTCGGA GTTCGTTCCC GAGGACGTCA TCCGTGTCGT GGAACCCCGC AGGGGCGTCG GGTGGCTGGA CGGGGTGCGC AAGGTGATCG AGCACGGGAG CTGGCCCAAG ATCCGCTGTG GCGGGGTGTC CAGCGAGAAC TTCCCGAGCG TGGACGAGGT CGCCGACTTC TTCGCCGTGG TCAGCAGCAC CCCCGGCGCG TCGTTCAAGG CCACCAACAG CCTCCACAGG GCCGTGCGCC ACACCGACCC CGAAACCGGC TTCGAGCACC ACGGTTTCCT CAACATGCTG GTCGCCGCCG GTCGGAGCCT GTCGGGCGGA GACGTGCGGG AGGCCTTGGC CAGCACGGAC GGCGAACAGC TCGCCGAGGA GGTCAAGCAG CTCAGTGAGG AGGCCGCCAA GGCGGTTCGG TCACTGTTCG CCTGCTACGC CTCGGGGACC TTCCACGAGT CGATCTCCGA TCTGCAGGGG TTGGGTCTGC TGTGA
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Protein sequence | MELPPPGPRG IPTLLARLVD DSALFPPGEA AMPDALASYL EHRSGEYAGV QGVFLCPASR LAEMITELIK IRPKEPLPLS LIIDTGLGGV PKAISIVESR EELLSLRMVE MPAPSDVDEV WLERVSEFVP EDVIRVVEPR RGVGWLDGVR KVIEHGSWPK IRCGGVSSEN FPSVDEVADF FAVVSSTPGA SFKATNSLHR AVRHTDPETG FEHHGFLNML VAAGRSLSGG DVREALASTD GEQLAEEVKQ LSEEAAKAVR SLFACYASGT FHESISDLQG LGLL
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