Gene Svir_01030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01030 
Symbol 
ID8385441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp103796 
End bp104650 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content67% 
IMG OID644974207 
Producthypothetical protein 
Protein accessionYP_003132018 
Protein GI257054186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.331625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACTCC CGCCCCCCGG CCCTCGTGGA ATCCCAACCC TGCTCGCCAG GCTTGTCGAC 
GACTCGGCCC TGTTCCCGCC GGGCGAAGCG GCAATGCCTG ATGCGCTGGC CAGTTACCTG
GAACACAGGT CGGGTGAGTA CGCCGGAGTG CAGGGCGTCT TCCTGTGTCC GGCGTCCCGG
CTGGCGGAGA TGATCACTGA GCTCATCAAG ATCCGGCCGA AGGAACCGCT GCCGCTGTCG
TTGATCATCG ACACGGGGCT CGGCGGCGTA CCGAAGGCCA TCTCCATCGT CGAATCGCGC
GAGGAGCTGC TGTCGCTGCG GATGGTGGAG ATGCCCGCAC CCTCCGACGT CGACGAGGTC
TGGTTGGAAC GAGTGTCGGA GTTCGTTCCC GAGGACGTCA TCCGTGTCGT GGAACCCCGC
AGGGGCGTCG GGTGGCTGGA CGGGGTGCGC AAGGTGATCG AGCACGGGAG CTGGCCCAAG
ATCCGCTGTG GCGGGGTGTC CAGCGAGAAC TTCCCGAGCG TGGACGAGGT CGCCGACTTC
TTCGCCGTGG TCAGCAGCAC CCCCGGCGCG TCGTTCAAGG CCACCAACAG CCTCCACAGG
GCCGTGCGCC ACACCGACCC CGAAACCGGC TTCGAGCACC ACGGTTTCCT CAACATGCTG
GTCGCCGCCG GTCGGAGCCT GTCGGGCGGA GACGTGCGGG AGGCCTTGGC CAGCACGGAC
GGCGAACAGC TCGCCGAGGA GGTCAAGCAG CTCAGTGAGG AGGCCGCCAA GGCGGTTCGG
TCACTGTTCG CCTGCTACGC CTCGGGGACC TTCCACGAGT CGATCTCCGA TCTGCAGGGG
TTGGGTCTGC TGTGA
 
Protein sequence
MELPPPGPRG IPTLLARLVD DSALFPPGEA AMPDALASYL EHRSGEYAGV QGVFLCPASR 
LAEMITELIK IRPKEPLPLS LIIDTGLGGV PKAISIVESR EELLSLRMVE MPAPSDVDEV
WLERVSEFVP EDVIRVVEPR RGVGWLDGVR KVIEHGSWPK IRCGGVSSEN FPSVDEVADF
FAVVSSTPGA SFKATNSLHR AVRHTDPETG FEHHGFLNML VAAGRSLSGG DVREALASTD
GEQLAEEVKQ LSEEAAKAVR SLFACYASGT FHESISDLQG LGLL