Gene Svir_00610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00610 
Symbol 
ID8385399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp60595 
End bp61287 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content68% 
IMG OID644974165 
Producthypothetical protein 
Protein accessionYP_003131977 
Protein GI257054145 
COG category[S] Function unknown 
COG ID[COG4549] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0768346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACCG CCGTGGCCGC CGGGACGACC ATGCTGCTCG CGGGCGGCAT CGCGTCGGCC 
CACGTCACCG CCAACGTCTA CGGTGACACC CCCGAGAAGG GCGGCTACGG CGCCATCGTG
CTGCGAGTGC CCAACGAAGA GGAACGGGTG GGCACCACCA AACTGGAAAT GACCCTCGAC
CCCGAGTACG GCATCACGTC GGCCCGCACC AAACCCGTCC CCGGGTGGAC GGCCGAGGTC
ACGAAGACCG ACGATGTCGT GACCAAGATC ACGTGGACGG CCGAGGACGG CCACGAGATC
GCGGCCGGCA GTCACTCCTA CGAGGAGTTC GAGTTCGTCA TCGGCGCGTT GCCCGACGAC
GTCGACACCC TCGTACTGCC CACCGCGCAG ACGTATTCCA ACGGCAAGAC CGTGAACTGG
GAGCAGCCGC CGACGGACGA CGACGCCGAA CGCCCCGCAC CCGTCGTGGA ACTCGCCGAA
TCGTCCGGTT CGGGCCATAG TCACGGCTCC GGTCCCACAC ACGGGGACTC GAATCACCAC
CCGTCGGAGA ACGCCGAGGA CGCGGCGGGA AGCACCGACG CGACCGACGA CACGGCGCGG
TTGCTCGGCG GTGCGGGTCT CGTGCTCGGA GCTCTCGGAT TGGGTCTCGG AGTGGGTGCC
ACCATGCGGG CCAGGAAGGC AGGAAAGTCA TGA
 
Protein sequence
MVTAVAAGTT MLLAGGIASA HVTANVYGDT PEKGGYGAIV LRVPNEEERV GTTKLEMTLD 
PEYGITSART KPVPGWTAEV TKTDDVVTKI TWTAEDGHEI AAGSHSYEEF EFVIGALPDD
VDTLVLPTAQ TYSNGKTVNW EQPPTDDDAE RPAPVVELAE SSGSGHSHGS GPTHGDSNHH
PSENAEDAAG STDATDDTAR LLGGAGLVLG ALGLGLGVGA TMRARKAGKS