Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00610 |
Symbol | |
ID | 8385399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 60595 |
End bp | 61287 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974165 |
Product | hypothetical protein |
Protein accession | YP_003131977 |
Protein GI | 257054145 |
COG category | [S] Function unknown |
COG ID | [COG4549] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0768346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGACCG CCGTGGCCGC CGGGACGACC ATGCTGCTCG CGGGCGGCAT CGCGTCGGCC CACGTCACCG CCAACGTCTA CGGTGACACC CCCGAGAAGG GCGGCTACGG CGCCATCGTG CTGCGAGTGC CCAACGAAGA GGAACGGGTG GGCACCACCA AACTGGAAAT GACCCTCGAC CCCGAGTACG GCATCACGTC GGCCCGCACC AAACCCGTCC CCGGGTGGAC GGCCGAGGTC ACGAAGACCG ACGATGTCGT GACCAAGATC ACGTGGACGG CCGAGGACGG CCACGAGATC GCGGCCGGCA GTCACTCCTA CGAGGAGTTC GAGTTCGTCA TCGGCGCGTT GCCCGACGAC GTCGACACCC TCGTACTGCC CACCGCGCAG ACGTATTCCA ACGGCAAGAC CGTGAACTGG GAGCAGCCGC CGACGGACGA CGACGCCGAA CGCCCCGCAC CCGTCGTGGA ACTCGCCGAA TCGTCCGGTT CGGGCCATAG TCACGGCTCC GGTCCCACAC ACGGGGACTC GAATCACCAC CCGTCGGAGA ACGCCGAGGA CGCGGCGGGA AGCACCGACG CGACCGACGA CACGGCGCGG TTGCTCGGCG GTGCGGGTCT CGTGCTCGGA GCTCTCGGAT TGGGTCTCGG AGTGGGTGCC ACCATGCGGG CCAGGAAGGC AGGAAAGTCA TGA
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Protein sequence | MVTAVAAGTT MLLAGGIASA HVTANVYGDT PEKGGYGAIV LRVPNEEERV GTTKLEMTLD PEYGITSART KPVPGWTAEV TKTDDVVTKI TWTAEDGHEI AAGSHSYEEF EFVIGALPDD VDTLVLPTAQ TYSNGKTVNW EQPPTDDDAE RPAPVVELAE SSGSGHSHGS GPTHGDSNHH PSENAEDAAG STDATDDTAR LLGGAGLVLG ALGLGLGVGA TMRARKAGKS
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