Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_2059 |
Symbol | |
ID | 3762665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | - |
Start bp | 2149905 |
End bp | 2151053 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | diheme cytochrome c SoxD |
Protein accession | YP_394568 |
Protein GI | 78778253 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000173988 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAAAT TAAATAATAA ATTAATTATT TTAGGGGTTT CTGTGGTTGC AAGCAGTGCT CTGTTTTTCA CAGGTTGTTT AGGTTCAAAT GCTTCTGCTG GAAACTCATC AGCAAAAGTA AGCTCAGCAG CAAATGGTAT GTATAATCCA ACAAAAGACG CTCTTGATGG TGGTGTTACA TACAAAAGAG AAAATGGTAT GTATGCTGCG TATGCTGTTA ATGACCAAGC TACAACTGGT GTAAACTTTG GTAGAACACC AACTCCAAAT GAGCTAAAAG CATGGGATAC AGATATTATG CCAGATGGTA CGGGCTTACC AGTTGGTAGC GGTACTGTTG ATGATGGTGA AGCACTTTAT GATAAAGATT GTGCTGTTTG TCATGGTGAG TTTGGTGCAG GCGGTAAAGG TTACCCAACT CTAACGGGTG GTTCTTTAAA ATCATTATCA AACCAAAGAA CTTGCCCTGG CAAAGATGCT CCAAATAGAA CAATTGGTTC ATATTGGCCA CAAGCTAGTA CGTTGATTTG GTATATTCGT GATGCAATGC CATATGCAAA CCCAAAAAGT TATACACCAG ATCAGATGTA TGCTATGACG GCTTACTTGC TAAAAGAAAA TGGTGTTAAA ATAGATGGTG AAGATATTGA AGAGTTAAAT CAAGATAACT TCAAAAAGAT AGTTATGCCA AATCGTGATG GATTTTATCC AAATATTGAT GGACCAAATG GTGTAGAAAA TGTTAAAGCA TTCTACAAAG ATCCTAAGAA CTTTGGTGCA GTTGGAGTAC GTTGTATGAC TAACTGTGGA AAAGAGAGTG TAGCAACAAT AGGAAACGAG ATAACTGCGG TAGTACCTGC TTACTCTACT CTAAGAGATC TTCCACCAGA AAGCGCAAGT GGACCAGTGT CAGAGGCTCA AAAGATATAT GAAAAATCAT GTGCAGTTTG CCACAAAACT GACACTATGG GTGCACCTGC GCTTGGAGAC AAGAATGCTT GGGCAACCGT ATTAGAGCAA GGTATAAACA TGGTAAATAA CAATGCAATC AATGGTATTG GCGGTATGCC TCCAAAGGGT GGCGCTATGG ATTTAAGTGA CGACCAAGTC AAAGATGTTG TTAAATTTAT GGTAGAATCT AGTAAGTAG
|
Protein sequence | MIKLNNKLII LGVSVVASSA LFFTGCLGSN ASAGNSSAKV SSAANGMYNP TKDALDGGVT YKRENGMYAA YAVNDQATTG VNFGRTPTPN ELKAWDTDIM PDGTGLPVGS GTVDDGEALY DKDCAVCHGE FGAGGKGYPT LTGGSLKSLS NQRTCPGKDA PNRTIGSYWP QASTLIWYIR DAMPYANPKS YTPDQMYAMT AYLLKENGVK IDGEDIEELN QDNFKKIVMP NRDGFYPNID GPNGVENVKA FYKDPKNFGA VGVRCMTNCG KESVATIGNE ITAVVPAYST LRDLPPESAS GPVSEAQKIY EKSCAVCHKT DTMGAPALGD KNAWATVLEQ GINMVNNNAI NGIGGMPPKG GAMDLSDDQV KDVVKFMVES SK
|
| |