Gene Suden_1929 details

Gene Information

• Locus tag: Suden_1929
• ID: 3763050
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurimonas denitrificans DSM 1251
• Kingdom: Bacteria
• Replicon accession: NC_007575
• Strand: +
• Start bp: 2013408
• End bp: 2014094
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 40%
• Product: Sel1 repeat-containing protein
• Protein accession: YP_394438
• Protein GI: 78778123

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAAAA AAGCTCACGA CGCATATAAC AACAAAGATT TTGAGAGTGC ATTTAAACTC 
TACACACAAC TATCAAACGA GGGAAATGCT GATGCTATGG CATCTCTGGG TTACATGTAC 
CAAAACGCTC AAGGTTGTGA TATAGATGAA AAAAAAGCTC TCTCTCTTTA CGAGAGAGCC 
GCTGAACTTA AACAGCCTTA TGCTCTTTAT AATTTAGGGA TTTTATATAT GAACGGTCTT 
GGCGGAGTAG AGCATGACCA GTTTAAGGCA CATGACTTTT TTATGGAAGC TGCAACTAGA 
GAGGTTGTTC CAGCAATGTA TGAGACAGCT CTTATGTTGG AGCGTGGGCT TGGATGTTTA 
CAAAACTTCT CAGAGGCTGC CTTTTGGTAT GAGGAGGGAG CAAAAAGAGG ACATCTGGAA 
TCTTTTAACA ACCTTGGTGT TTTATACAAA GAGGGACATG GTGTTCATAA AGATGAGGCA 
AGATGCTTTA TCTGTTTTAA GAGAGCCGCA GATGGCGGTC TTGCAGAGGG ACTTTACAAT 
CTTGGACTGC TTTATGATCA AGGATTTGGA TGTGCACAAG ATCATGACAT GGCACTAGAC 
TTATGTAGAA AAGCCGCTTA CAAGGGTCAT ACAAAGGCGC AAGAGATTAT AAAAGGTCTT 
CAAGAAGAGG GCAAAATAGT ATTTTAA 

 

Protein sequence

MIKKAHDAYN NKDFESAFKL YTQLSNEGNA DAMASLGYMY QNAQGCDIDE KKALSLYERA 
AELKQPYALY NLGILYMNGL GGVEHDQFKA HDFFMEAATR EVVPAMYETA LMLERGLGCL 
QNFSEAAFWY EEGAKRGHLE SFNNLGVLYK EGHGVHKDEA RCFICFKRAA DGGLAEGLYN 
LGLLYDQGFG CAQDHDMALD LCRKAAYKGH TKAQEIIKGL QEEGKIVF