Gene Suden_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1710 
Symbol 
ID3762737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp1791989 
End bp1793188 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content38% 
IMG OID 
ProductNa-Ca exchanger/integrin-beta4 
Protein accessionYP_394221 
Protein GI78777906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACCT ATCTCAACAA TTATCTTGAT TCAAGGTACA AAACATACAA AAATGATTTT 
TACAATGGAG TAGTAAGAGT ATCTTATGGT GGGTATTTTG CAACAGGCAC TCTCCTTTAT
GATGGAGTCT CTATTTTAAC ATCAGCTCAT CTTTTTAATT CATTAGCTCC CTCAGATACA
ACGGTGCGGC TTGAGACATC TTTAGGAACC GTTACTTATG ATGCTTCGTA CACAAAGTAT
GAAAAATATG ACCCAACTAG TGCAAACGGA GATTTGGCGA TTGTTAAACT TTCGCAATCT
GCACTTGTAG ATGCTCAACG ATATACACTT TATAGGCAGA GTGATGAGAT AGGAAAAACG
TTTACAATGG CTGGATATGG CATACATGGA AACGGAGCTA CTGGCGTGGA TGAGAGAGAT
ACAAATCAGA TTTTAAAACT CAAGACTCAG AACACTTTTG ATGCAGATTT TGCCGATATA
AAAGCAAAAA CAAACTTAAG CTGGTCGCCC TTAGCAGGCT CACAACTAGC CGCTGACTTT
GATGATGGCT ATGCTGAGCA TGATGCCATA GGTATGATAA TGGGAAATGC CAATGCAGGA
TTAGGAACAA TGGAGGGATT AATAGCATCT GGAGATAGTG GTGGACCTGC TTTTATAGAT
AATAAACTAG CAGGAGTCGC AACTTTTGTT GCAACCATAG ATGTTAATGG TATAAGCCCT
GATATAAATA GCTCTCTTGA CTCAAGTTTT GGTGAGGTTG CATCTTGGCA GCGTATAAGT
TATTATCAAG AGTGGATAGA TAAAACTATC AGAACAAGTT ATCTAGATGC TCCCACAAAA
CCCCAAGATG TCGTAAAAAA CATAAAAGAA GGTGCAGATT CAGAGGTAAG CACCACTTAC
TTTTTAGTTC AATATCTAGG AATCCGTGCA GACATTGGCG AAATAATAAG TGTTGATTAT
GCAACAAGAG ATGGAAGTGC TCGTGCTGGA GAAGATTATA TAGCAACAAA AGGAACTCTT
ATATTATATC TAGATGAAAC TCAAGCCCTT ATACCTGTTG AAATCATTGG AGATAGTTAT
TATGAGGAAG ATGAGACTTT CTATTTGGAC ATTTACAATA ATAGTCATGG CAGTTTAGGA
GATGGTGTGG TTATGCTAAG CGCTATGAGA ACAATAATAA ATGATGATTT TTTACTCTAA
 
Protein sequence
MTTYLNNYLD SRYKTYKNDF YNGVVRVSYG GYFATGTLLY DGVSILTSAH LFNSLAPSDT 
TVRLETSLGT VTYDASYTKY EKYDPTSANG DLAIVKLSQS ALVDAQRYTL YRQSDEIGKT
FTMAGYGIHG NGATGVDERD TNQILKLKTQ NTFDADFADI KAKTNLSWSP LAGSQLAADF
DDGYAEHDAI GMIMGNANAG LGTMEGLIAS GDSGGPAFID NKLAGVATFV ATIDVNGISP
DINSSLDSSF GEVASWQRIS YYQEWIDKTI RTSYLDAPTK PQDVVKNIKE GADSEVSTTY
FLVQYLGIRA DIGEIISVDY ATRDGSARAG EDYIATKGTL ILYLDETQAL IPVEIIGDSY
YEEDETFYLD IYNNSHGSLG DGVVMLSAMR TIINDDFLL