Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_1566 |
Symbol | |
ID | 3763160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | - |
Start bp | 1639261 |
End bp | 1642233 |
Gene Length | 2973 bp |
Protein Length | 990 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | transcription-repair coupling factor |
Protein accession | YP_394078 |
Protein GI | 78777763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCAAA GCAGACTATT TAACTACTAT AAAACCACAA AAAAATCAGA TTTAGAGATT CTTCTTTGTG AGGATGCAAA AGAGGCACAA GAGCTAAAGA GTGTAGCTCT GTTTTTTGGA AAAGAGGTTA TTGTTTTTCC AGATTTTAGA GCAACGCACG GCGATGATTT GAGAGTTTAC AAAGAGGAGT TGCACCAGCT CTTTAGCTCT TTGAGAAATT ATTACAGCGC TAAAGTTAAG CCATTAATTA TCTCTCCGCT AAAAACGCTA CTCTTTGAGA TGCCCCAAGA GTCTCTGCTT AAATCAAGAG TTATAGAGTT TGGAGAAAAA ATAGAGTTTA GAGCCTTTCA ACAACAGATG CTCCTTTGGG GATACAACTT TGTTGATATG GTTCAAGTTG AGGGCGAAAT CTCTTTTAGA GGCGATATTA TCGACATATA TCCGCCATCA AGCAAAATGC CACTTAGAAT TTCACTCTTT GATAATGAGA TAGAGCAGAT AAAGTATTTT GAGCTTGAGT CTCAAAGAAC GCAAAAAGAG GAGTTAGAGA GTTTTGAACT TACTCCTGCT TTTTTCTCTT TGGATGAGAG CGAGTTTGAT ATGTTAAATG AGAGAGTGCA AAAAAGTGAA TTTGACTCTC TTGTAAAAGA TATAGCATCT CTTGGTCTAT GGCACCTTGA TGATAGTGGT GTAAACTTTT TAGAATCAAA AAATGTAAAG CTATCAAGAG AGCTAAATGC ACCTCTTATA GACGCTTACG CACTAAATAA ACCAACAATT TCAAGAGAGT GTTTTAATGT AGAGGTTTTA GAAGAGAGTG ATGATTTTAA AGAGATTTCT GTCTCAGATT TGCACGCATT TTTAAAAGTT CATAAAGCTA AAAAAACTAC TATTATCGCC TCAAATGAGG CAGTTATAAA ACAAGCTGGG CTTTTTGATG TTAGTGGATT GAAAATCCTT TACGCTCCAT ATATCTTAAA TATCATGGGC AAAGATGAAC TTGTAATTTC ACTAAATAAA CAAACTAAAA TTAAGCGAAG AAGAAAAAGC TCTATCTTGC TTGATGACCT TAAAGTAGGC GATTATGTTG TCCATGAAGA TTATGGGGTT GGTATTTTTG AGGGGATTGA GCAGACAGAG ATTCTTGGCG GGGTAAAGGA TTTTATAGTT ATAAAGTATA TCGGTGATGA TAAGATTTTG CTTCCAGTGG AAAATCTCGA CGCCATTGAC CGCTATATCG CTTCTGGTGG GTCTGTTCCT GTTTTAGACA AGCTTGGTAA AGGAAGTTTT GGCAAACTCA AAGAGAGCGT AAAAAAACGT CTCCTTGAGA TAGCAGGGCA AATCGTAAAT ACAGCTGCTG CGAGAGAGCT TATCACTGCG CCAAAAATAA ACGTTGATGA AGATGAGCTA AGAGCGTTTC AAAAGCTCTC AGGGTTTCTT TATACAGATG ATCAGAGCCA ATCAATCAAC GAGATAATTA CCCAGATGAG CTCAGGGCAC ATCATGGATA GACTTCTTAG CGGAGATGTT GGTTTTGGTA AGACAGAAGT TGCGATGAAT ACTATCTTTG CAGCCTATAA ATCAGGCTTT CAATCGGCTC TTATAGTTCC CACAACACTT CTCTCAGCAC AACACTACCG CTCGCTTCAT GAGAGATTTG ATGCACTTGG TATAAAGTGC TCAAAACTGG ATAGATTTGT AAGTGCAAAA GATAAAACGA ACATCATAAA AGCACTCTCA AGTGGAGATT TGGATGTAGT TGTTGGAACT CACACTCTCT TCGATCTTGA TTTTAAAAAG CTCGGCGTGG TTATTATAGA TGAAGAGCAT AAGTTTGGGG TAAAGCAAAA AGAGAAGATT AAAGAGCTTT ATCATAATGT TCATCTTCTC TCAATGAGCG CAACTCCAAT CCCGCGTTCA CTAAATCAAG CACTAAGCTC CATAAAGACG ATGTCACAAC TACTAACTCC GCCAAGCCAA AGACAGCCAG TTAGAACATT TGTAAAAGCG TATGAAGAGA AGCTCATAAA AGAGGTGCTA CTTCGTGAGA TACGCAGAGG TGGACAGATA TTTTATGTGC ATAACTCCAT AGATCATATG CCTATAAAAC TAGGCGAGTT AAAAGCACTT CTGCCATCAC TAAGAGTTGT TATGCTTCAC TCAAAAATCT CTGCAACAGA TACAGAAAAA GAACTCTTAA AGTTTGAAGC AGGGGAGTAT GACTTGATGC TTGCCACTTC AATCATAGAG TCAGGCATCC ACATGCCACG AGTAAATACG ATTATAGTAG ATGGTGCAGA TAGATTTGGT ATGGCAGATT TGCATCAGCT TAGAGGGCGT GTTGGACGCT CAAATGTTGA GGGCTTTGCC TACTTTATAG TTAATGACAA AGAGACGCTA ACGGATGAGG CAAAAAAAAG ACTTTTAGCA CTTGAATCAA ACTCATTTTT GGGAAGCGGT TCTGTTTTGG CTTACCATGA TTTAGAGATA CGTGGCGGTG GAAATCTCGT CGGAGATGCA CAAAGCGGAC ATATAAAAAA TATAGGATAT TCGCTCTATC TAAGGCTTCT TGAAGATGCT ATCAAACTAC TAAGCAATCA AATGGAAGTT GAAAAGGCAA AAGTAGATAT AAAGCTCACC ATCTCAGCTT TCGTCTCAGA TGAAGTTGTA AAAGAGGATA GACTCCGTAT AGATATATAT AGAAGACTCT CCTCTTGCAT AGATAGCGTT GAGATATATG AGATACAAGA AGAGGTAATT GACAGATTTG GCGCACTTGA TGCTCCAACA AAACAGTTCT TTGAGTTAAT GGTTATAAAA GTATTAAGTC TCTCAAAAGG GATAAAAAGT GTTTCAAACT ATGGACAAAA CATAACGATT ACCTACATGG ATGAGAAAAA AGAGAGCATA AAATCAGACT CAAAAGATGA TGATGACATC ATAAAAGCGG TGCTGAAGTA TTTGAGAGCG TAA
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Protein sequence | MSQSRLFNYY KTTKKSDLEI LLCEDAKEAQ ELKSVALFFG KEVIVFPDFR ATHGDDLRVY KEELHQLFSS LRNYYSAKVK PLIISPLKTL LFEMPQESLL KSRVIEFGEK IEFRAFQQQM LLWGYNFVDM VQVEGEISFR GDIIDIYPPS SKMPLRISLF DNEIEQIKYF ELESQRTQKE ELESFELTPA FFSLDESEFD MLNERVQKSE FDSLVKDIAS LGLWHLDDSG VNFLESKNVK LSRELNAPLI DAYALNKPTI SRECFNVEVL EESDDFKEIS VSDLHAFLKV HKAKKTTIIA SNEAVIKQAG LFDVSGLKIL YAPYILNIMG KDELVISLNK QTKIKRRRKS SILLDDLKVG DYVVHEDYGV GIFEGIEQTE ILGGVKDFIV IKYIGDDKIL LPVENLDAID RYIASGGSVP VLDKLGKGSF GKLKESVKKR LLEIAGQIVN TAAARELITA PKINVDEDEL RAFQKLSGFL YTDDQSQSIN EIITQMSSGH IMDRLLSGDV GFGKTEVAMN TIFAAYKSGF QSALIVPTTL LSAQHYRSLH ERFDALGIKC SKLDRFVSAK DKTNIIKALS SGDLDVVVGT HTLFDLDFKK LGVVIIDEEH KFGVKQKEKI KELYHNVHLL SMSATPIPRS LNQALSSIKT MSQLLTPPSQ RQPVRTFVKA YEEKLIKEVL LREIRRGGQI FYVHNSIDHM PIKLGELKAL LPSLRVVMLH SKISATDTEK ELLKFEAGEY DLMLATSIIE SGIHMPRVNT IIVDGADRFG MADLHQLRGR VGRSNVEGFA YFIVNDKETL TDEAKKRLLA LESNSFLGSG SVLAYHDLEI RGGGNLVGDA QSGHIKNIGY SLYLRLLEDA IKLLSNQMEV EKAKVDIKLT ISAFVSDEVV KEDRLRIDIY RRLSSCIDSV EIYEIQEEVI DRFGALDAPT KQFFELMVIK VLSLSKGIKS VSNYGQNITI TYMDEKKESI KSDSKDDDDI IKAVLKYLRA
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