| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4584 |
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| Symbol | |
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| ID | 5061074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5174383 |
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| End bp | 5175363 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640476851 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001161390 |
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| Protein GI | 145597093 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.984407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000547053 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTACGA CCGCTGCCAA TCCCGCTGTC CTGACCGACC TGCGCGTGCT GGTGCTCGCC
GGCGGGCTCT CCTATGAACG GGATGTCTCG CTACGATCCG GCCGTCGGGT GCTCGACGCG
CTGCGCGCGG TGGGCGTGGA GGCAGAGCTG CGCGACGCGG ACGTCGCCCT GCTGCCTGCG
CTCGTCGCCG ACCCGCCGGA CGCGGTGGTC ATCGCGCTGC ACGGTGCGAC CGGCGAGGAC
GGCTCGCTCC GTGGTGTACT GGACCTCTGC GATGTCCCGT ACGTCGGCTG CGACGCCCGC
GCGTCCCGCC GTGCGTGGGA CAAACCCTCC GCCAAAACCG TGCTGCGAGA GGCACACATC
CCCACCCCGG ACTGGGTGGC CCTACCCCAT GACCGCTTCT CCGAACTCGG TGCGGTGGCG
GTGCTGGACC GCATCGTCGA CCGGCTGGGC CTCCCGCTGA TGGTGAAGCC CGCGCAGGGT
GGCTCGGGTC TGGGCGCCGC CGTGGTCCGG GACAGCGCCG CCCTGCCAGC CGCGATGGTC
GGTTGTTTCG CGTACGACTC CACCGCCCTC GTCGAACGCT ACCTGTCCGG GACGGACGTG
GCGGTATCCG TCATCGACCT CGGCGAAGGA CCGCAGGCCC TGCCGGCGGT GGAGATCGTG
CCCCGAAACG GCGTGTACGA CTACGCGGCC CGGTACACCG CCGGCCGCAC CACGTGGCAC
ACACCGGCCC GGCTGACCAG CGAGGTGGCC GAGGCGGTCG CCGGACTCGC CGTTGCCGCC
CACACCGCGC TCGGGTTACG CGACCTCAGC CGCGTCGACC TGATCGTTGA TGCCGACGGT
CAGCCGCACG TACTCGGAGT GAACGTCGCG CCCGGCATGA CGGAGACCTC ACTGCTACCG
CTCGCGGCCC AGGCCGCCGG TCTCGACTTC GGTCGAATGA TCGGGACCCT GGTTTCCCAG
GCTGCCGCCC GGGCAGCCTG A
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| Protein sequence | MGTTAANPAV LTDLRVLVLA GGLSYERDVS LRSGRRVLDA LRAVGVEAEL RDADVALLPA
LVADPPDAVV IALHGATGED GSLRGVLDLC DVPYVGCDAR ASRRAWDKPS AKTVLREAHI
PTPDWVALPH DRFSELGAVA VLDRIVDRLG LPLMVKPAQG GSGLGAAVVR DSAALPAAMV
GCFAYDSTAL VERYLSGTDV AVSVIDLGEG PQALPAVEIV PRNGVYDYAA RYTAGRTTWH
TPARLTSEVA EAVAGLAVAA HTALGLRDLS RVDLIVDADG QPHVLGVNVA PGMTETSLLP
LAAQAAGLDF GRMIGTLVSQ AAARAA
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