| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4583 |
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| Symbol | |
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| ID | 5061073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5173062 |
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| End bp | 5174375 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640476850 |
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| Product | aminotransferase, class I and II |
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| Protein accession | YP_001161389 |
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| Protein GI | 145597092 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000597747 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGGCA CGACGCTCGA CGACTACACT GACCGTTACG CCCGACGGGT CCGAGGCATG
ACCGCCTCGG AGATCCGGGC ACTCTTCGCG GTGGCCAACC GGCCGGAGGT GGTCTCGCTT
GCCGGGGGTG CGCCGTACGT CGCTGCTCTC CCCCTGGACG CGGTCGGCGA GATGCTCGGC
CGGCTCGGCG CCGACCACGG CATCACCACC CTGCAGTACG GCATCGGCCA GGGCACTCCC
GAGCTACGTG AGCGGATCTG CGAGGTGATG TCGCTCTCCG GCATCGACGC CGCCTGCGGC
GCCTCTCCCG ACGACGTCGT CGTCACCGTC GGCGGCCAGC AGGCGCTGGA CCTGGTCGCG
CGCCTCTTCC TCGACCCCGG CGACGTCGTG CTCGCCGAAG GCCCGACCTA CGTCGGGGCG
CTCGGAGTCT TCCAGGCCGC CCAGGCCCAG GTCGTGCACG TGCCGATGGA CAATGACGGG
CTGATCCCGG AGGCGCTGGA GACGGCCATC GCCGATCAGG CACGCGCCGG GCGCCGAATC
AAGTTCCTCT ACACCATCCC CACGTACCAG AATCCGACCG GTGTGACGCT GACCGAGCAG
CGGCGCGAAC GGGTCCTCGA CATCTGCGAA CGCGCCGGCC TGCTGGTGGT GGAGGACGAC
CCGTACGGGC AACTCGGCTT CGAGGGCGAC GCCCCGGCCC CGCTGCGCGC TCGCCGCCGG
GATGGCGTCT TCTACCTGGG CACGTTCTCG AAGACCTTCG CGCCGGGGCT GCGGGTCGGC
TGGATCCTCG CCCCGCACGC GGTGCGGGAC AAGCTCGTCA TCGCCAGTGA GGCACAGATC
CTCTGCCCCA GCGGCTTCGC TCAGGCAGCC GTGGCCACCT ACCTCGGCAC GATGCCGTGG
CGGGAGCAAC TCAAGGTCTA TCGGGAGGTC TACCGGGAAC GGCGGGACGC GCTCCTCGCG
GCCATGGCGG ACCTGATGCC AGCCGGTACG GCGTGGACCC GGCCCGGAGG CGGCCTCTTC
GTCTGGGCCA CGCTGCCGGA CGGGCTGGAC TCGAAGGCGA TGATGCCCCG CGCCATCGCC
GCCCGGGTGG CGTACGTGCC CGGCACCGGC TTCTATGCCG ACGGCACCGG CAACGACGCG
ATGCGCCTGA ACTTCTCCTT CCCGCCGCCC GAGCGGATCC GGGAGGGCGT ACGGCGGCTC
TCCGGAGTAA TGGAGCAGGA CATCGCCATG CGCCGGGTCT TCGGCGCTGT CGGCCGTCCC
GGCTCTCGTC GAGGGCGGGC CGGTTCGGAC ACGCCCGGAC CGGACTTGGC ATGA
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| Protein sequence | MTGTTLDDYT DRYARRVRGM TASEIRALFA VANRPEVVSL AGGAPYVAAL PLDAVGEMLG
RLGADHGITT LQYGIGQGTP ELRERICEVM SLSGIDAACG ASPDDVVVTV GGQQALDLVA
RLFLDPGDVV LAEGPTYVGA LGVFQAAQAQ VVHVPMDNDG LIPEALETAI ADQARAGRRI
KFLYTIPTYQ NPTGVTLTEQ RRERVLDICE RAGLLVVEDD PYGQLGFEGD APAPLRARRR
DGVFYLGTFS KTFAPGLRVG WILAPHAVRD KLVIASEAQI LCPSGFAQAA VATYLGTMPW
REQLKVYREV YRERRDALLA AMADLMPAGT AWTRPGGGLF VWATLPDGLD SKAMMPRAIA
ARVAYVPGTG FYADGTGNDA MRLNFSFPPP ERIREGVRRL SGVMEQDIAM RRVFGAVGRP
GSRRGRAGSD TPGPDLA
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