Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4516 |
Symbol | |
ID | 5061006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 5105920 |
End bp | 5106852 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640476783 |
Product | hypothetical protein |
Protein accession | YP_001161322 |
Protein GI | 145597025 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGTCCGA CCCCCACCAT CCCACGCCGC CCTCTAGGCT GTCCGACCGT GAGCAAGCGT CGAAAGAGCC AGCGGGCCAC GGACCCCACC AGGAAACGGG AGAAGGTTCG GGATGTCTTC GTACCCCGCC CCTTCGAGGG CCTGACCGAC GAGCCGGAGT GGATTGCCCT ACGCGAGCTG GTGCCGGCCG CCACCGCGCC GCTGCGCCTC GCCCCCGACC TGGTGACCGA GTTCGGCGAG CGGGACGTCC TGCTGGCCAC CGTCCTGCCG GTGGCGGCAC CGGCGATGGT GCAGCCAACC GGCCGGGTCC TGCTCGGCCT CCAGCGGCAT CAGCAGTCCG GCGACGTCTC CCGGGACCTG GCCGAGGCGT TGCTCTGCGC ACTACGTACC GAGCCCGGCC GCCAGGTCAG CGTGCCGCCG TTGCCCGGCC CGGGGCCCCG ACTGCCGGAC GTGCTGGTTG ATGCTCCGCT GGAGATCAGC CTGCACGAGA GCTTCGAGTT CTGGCTCGAC CCGGGCGCGG CCAACGATCC GACCGTGCAG GCATCGCTGG AGCGGGCCGA CGCCGCGATC TACCCGACCG TGCGGCTCAC CGCGGCCCGC GCGGCCTACT GGTGCCAGGT CCCGGAGAAG GCACACGTCC GGTGGGTGCT CCCCGACGAC GAGGACGCCG CATTGGACAC GCTGGCCCAC CTCAGCGCGG CCGGCACGTT GACCTTGGGG GAGGAGACGA AGTTCGCCGG AATGTTCCGC GCGCACGGCC GCCTCGTGCC GGTTTGGGAT CTTCCTGAGG AGACTCCTGC TGGCCACTGG GAGCAGCCAG TGGCGGAGTT CGCCGAACGC TACGGCGCGA CCCTCGCAGC CGCCGCCCCC CTGGACGCGG CGGCCCGTCG CGCGCGGCAC GGTCTCCTCG GCCGCCAGCT CACCCTCCGC TAG
|
Protein sequence | MGPTPTIPRR PLGCPTVSKR RKSQRATDPT RKREKVRDVF VPRPFEGLTD EPEWIALREL VPAATAPLRL APDLVTEFGE RDVLLATVLP VAAPAMVQPT GRVLLGLQRH QQSGDVSRDL AEALLCALRT EPGRQVSVPP LPGPGPRLPD VLVDAPLEIS LHESFEFWLD PGAANDPTVQ ASLERADAAI YPTVRLTAAR AAYWCQVPEK AHVRWVLPDD EDAALDTLAH LSAAGTLTLG EETKFAGMFR AHGRLVPVWD LPEETPAGHW EQPVAEFAER YGATLAAAAP LDAAARRARH GLLGRQLTLR
|
| |