Gene Strop_4516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4516 
Symbol 
ID5061006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5105920 
End bp5106852 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content73% 
IMG OID640476783 
Producthypothetical protein 
Protein accessionYP_001161322 
Protein GI145597025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTCCGA CCCCCACCAT CCCACGCCGC CCTCTAGGCT GTCCGACCGT GAGCAAGCGT 
CGAAAGAGCC AGCGGGCCAC GGACCCCACC AGGAAACGGG AGAAGGTTCG GGATGTCTTC
GTACCCCGCC CCTTCGAGGG CCTGACCGAC GAGCCGGAGT GGATTGCCCT ACGCGAGCTG
GTGCCGGCCG CCACCGCGCC GCTGCGCCTC GCCCCCGACC TGGTGACCGA GTTCGGCGAG
CGGGACGTCC TGCTGGCCAC CGTCCTGCCG GTGGCGGCAC CGGCGATGGT GCAGCCAACC
GGCCGGGTCC TGCTCGGCCT CCAGCGGCAT CAGCAGTCCG GCGACGTCTC CCGGGACCTG
GCCGAGGCGT TGCTCTGCGC ACTACGTACC GAGCCCGGCC GCCAGGTCAG CGTGCCGCCG
TTGCCCGGCC CGGGGCCCCG ACTGCCGGAC GTGCTGGTTG ATGCTCCGCT GGAGATCAGC
CTGCACGAGA GCTTCGAGTT CTGGCTCGAC CCGGGCGCGG CCAACGATCC GACCGTGCAG
GCATCGCTGG AGCGGGCCGA CGCCGCGATC TACCCGACCG TGCGGCTCAC CGCGGCCCGC
GCGGCCTACT GGTGCCAGGT CCCGGAGAAG GCACACGTCC GGTGGGTGCT CCCCGACGAC
GAGGACGCCG CATTGGACAC GCTGGCCCAC CTCAGCGCGG CCGGCACGTT GACCTTGGGG
GAGGAGACGA AGTTCGCCGG AATGTTCCGC GCGCACGGCC GCCTCGTGCC GGTTTGGGAT
CTTCCTGAGG AGACTCCTGC TGGCCACTGG GAGCAGCCAG TGGCGGAGTT CGCCGAACGC
TACGGCGCGA CCCTCGCAGC CGCCGCCCCC CTGGACGCGG CGGCCCGTCG CGCGCGGCAC
GGTCTCCTCG GCCGCCAGCT CACCCTCCGC TAG
 
Protein sequence
MGPTPTIPRR PLGCPTVSKR RKSQRATDPT RKREKVRDVF VPRPFEGLTD EPEWIALREL 
VPAATAPLRL APDLVTEFGE RDVLLATVLP VAAPAMVQPT GRVLLGLQRH QQSGDVSRDL
AEALLCALRT EPGRQVSVPP LPGPGPRLPD VLVDAPLEIS LHESFEFWLD PGAANDPTVQ
ASLERADAAI YPTVRLTAAR AAYWCQVPEK AHVRWVLPDD EDAALDTLAH LSAAGTLTLG
EETKFAGMFR AHGRLVPVWD LPEETPAGHW EQPVAEFAER YGATLAAAAP LDAAARRARH
GLLGRQLTLR