Gene Strop_4489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4489 
Symbol 
ID5060979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5079100 
End bp5079828 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content71% 
IMG OID640476756 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001161295 
Protein GI145596998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.209705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCACT CGGTGAACAC CTTGGCTGAA CCAGCCCGGC CGACCCTGAC CGACTTCTAC 
CGAACCAACC GGGGCGGCGG GCTGTTCAGC GAGTCGGTCA GCCAGTGGAT CGGGGCGGCC
TTCGCCGACG TCGCGCACCG ACTCGGGCTG CGGCCCACCG CGCTGACCAT CGCCAACCTG
ATACTCGGCC TGCTCACCTC GGTGACGGTG GTGGCGCTGG CCGGGCCGGT CGCCACGGGC
CGCGTACCGG CCTGGTTGGT CGGGATCGTG GCGCTGGTCG GCTGGCAGGC GGCGTACGCG
CTGGACTGCG CGGACGGACA ACTTGCCCGG GTCACCGGTC AGGGCAGCCC AGCCGGGGCG
CGGGTGGATG TGCTCAGCGA CGTGGCGGCC CAGATCGCGC TGGTCGCGGC GCTCACCGCG
ACCGCTGTCG CGCAGTCACC GTCGACTCCC GCCTGGCTGA TCGCGGCGTT CGCCGGCACC
TGGATGGTGA ACCTGGTCAC CTCGGTGATG CAGGCCGGGC CGAACGCGAC CAGCATGGTC
ACCTCGACCT CGCCGCTGGT ACGGCTGGTG AAGCTGACCC GCGACTACGG CGCGGTGATC
TTCGTTGCCG CCCTGGTGTT GTTCTTCGCG CCCAGCCTGA CCACCTGGTT GATCGTCGCT
TTCACCGCGG TCAACGGCGG CTTCCTGCTC GCGAGCATTG CCTTCGCCGC CCGGGCCTCA
CTGCGCTGA
 
Protein sequence
MTHSVNTLAE PARPTLTDFY RTNRGGGLFS ESVSQWIGAA FADVAHRLGL RPTALTIANL 
ILGLLTSVTV VALAGPVATG RVPAWLVGIV ALVGWQAAYA LDCADGQLAR VTGQGSPAGA
RVDVLSDVAA QIALVAALTA TAVAQSPSTP AWLIAAFAGT WMVNLVTSVM QAGPNATSMV
TSTSPLVRLV KLTRDYGAVI FVAALVLFFA PSLTTWLIVA FTAVNGGFLL ASIAFAARAS
LR