| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4449 |
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| Symbol | |
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| ID | 5060938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5045395 |
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| End bp | 5046618 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640476715 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001161255 |
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| Protein GI | 145596958 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.315015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACAC CGGCTCGTGT CCTCGGACGG GTGCTCACCG GGTTCGGCGC GCTCGCTCTG
CTCTGTGTGC TGCTGGTCGG CGCCCCGGTG GCGCTGCTCG CGTTCGCCGG TAACCCGCTG
CCGGCGCAGG TGCCCACCCT CGGTGAGGTC GGCACCGTGT TGACCAGCCG CGACGACGGT
CAGCTCTTCA TCCGGGCGTT GGCGGTGGCC GGCTGGGCGG GCTGGGCCAC GTTCACCCTC
TCGGTGCTGG TCGAGCTGGG TGCCCTCGCC GTCCGTCGCC CGGCCCCCCG GTTGCCGGGG
ATGGGTCGGC AGCAGCGGGC CGCCGCCGCG CTGGTCGGTT CAGTCGCATT GATCTTGGTG
GCCAGTCCGG TCGCGGCCAG CGCGGCGGCG GTGGTGGTGG GCCCAACGGC ACCCACGGTC
GCGACGGCAG CCGCTGCGGC GCCGGCCAGC GGGGCGCTAC CCCGGGTGGA AGGACCGGTG
TCGGCCGCGC TGACCGAGCC GGTGCGGCAG GCGGCGAAGC CCGTGCCAAC CGCTGCGCCG
ACCGGTGAGT CGGAGCGGGA GCCGGTCTAT CGGGTGGCCC GGGGCGACTA CCTCGGATCG
ATCGCCGCGC GGTACCTGGA CGGTTTCGAG GACTACCAGA GCCTGGCCAC GCTGAACCGG
CTGACCGACC CGGACCGCAT CCACCCGGGC CAGCTCCTGC GGCTGCCCGC CGAGGCCCAC
GATCGTGGCC CCGGCCCGCA CGCCACCGGA GGGCTGGTCG CCCGCCCGAC CCCACCCCGG
CCGCCCGCGC CGGCACCGGC CGAGCAGTCG ACGCAGCCGC CACCGGCGGA GTCGGCGGTT
TCGGGTACGG CGGTCTCGGA CGCGTCCACG ACGGATACGA CAGCCTCGGG TCAGGCCGCC
CCGGGTCAGA CCGCCTCGGG TCAGACCGCC TCGGGTCAGA CCGCCTCGGG TCAGGCCGCC
CCGGGTCAGA CCGCCCCGGA CCCGGCGGCG GAGGTGCCGA TCGTGGCCGT GGGGGCGGCT
GGTCCCGGCG ATCCGGACCG GGTGAATCGG CCGCTCGCCG TCTCGGCCGT CCTCGCCGTG
TCGAGCATCG TCGGCGCGCA GATCGGCGCG GCGCTCGGCC TGCGCCGACG CCCGGCGACC
GCTCGCGCCG GGACCGGCCG TAAGGCGGTG ACGGCCGGGC GGCGGCAGTG GGAGCTGCCG
ACTGGCCGGC ACCGGCGGGA GTGA
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| Protein sequence | MSTPARVLGR VLTGFGALAL LCVLLVGAPV ALLAFAGNPL PAQVPTLGEV GTVLTSRDDG
QLFIRALAVA GWAGWATFTL SVLVELGALA VRRPAPRLPG MGRQQRAAAA LVGSVALILV
ASPVAASAAA VVVGPTAPTV ATAAAAAPAS GALPRVEGPV SAALTEPVRQ AAKPVPTAAP
TGESEREPVY RVARGDYLGS IAARYLDGFE DYQSLATLNR LTDPDRIHPG QLLRLPAEAH
DRGPGPHATG GLVARPTPPR PPAPAPAEQS TQPPPAESAV SGTAVSDAST TDTTASGQAA
PGQTASGQTA SGQTASGQAA PGQTAPDPAA EVPIVAVGAA GPGDPDRVNR PLAVSAVLAV
SSIVGAQIGA ALGLRRRPAT ARAGTGRKAV TAGRRQWELP TGRHRRE
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