Gene Strop_4425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4425 
Symbol 
ID5060911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5019448 
End bp5020356 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content65% 
IMG OID640476688 
Productalpha/beta hydrolase fold 
Protein accessionYP_001161231 
Protein GI145596934 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAC TTACCGCCGC GCAGGCCGCC GATCTGTTCC GTGCCCGACC AGATCGCTTT 
GTTGACGTGG GTCATGGCCA GGTCGCGGTT CGCAGTATCG GGGAGGGGCC AGACGTGCTC
TTTGTGCACG GATGGCCAGT CAGTGGGGCA ACATTCCGCA GCCTTTTGCC GTTCTTCGTT
CCGCACCTTC GTTGTCACGT TATTGATCTC GTTGGGGCAG GTGACAGCCG CTTTGACCGC
ACCGCCCGCA TCAATATCGC CGCCCAGTCG GCTGCGGTAC GACGCGTCGT GGACACCCTA
GCCCTGGACG AGGTGGCGGT TGTCGGCCAT GACAGTGGCG GGCTCATCGC GCGACATGCG
CTGGCGGGTG ATCCTCGCGT CCGATCCTGG GGTCTGATCG ACACCGAGCA GCCGCAGGGG
GCCCACTGGC GCCTTTCGCT GCTGTTCGCC ACCCGCCACC TACCCGGATT CGAGCGTCTG
CTGACGGTGG CGTCGAACAT CAGACCGCTG CGGCGAAACC GGTTCGTCCT CGGCGATGCC
TTCCACGACC GAGACCTTCT GGACGGAGAC TTCGCGGAGT TCTTCCTGCG GCCCCTCAAG
GAAAGCGCTG ACCGGCGTTG GGCCTTCGGT CAGTTCCCCC GGAACTTCGA CTTCTCGGCT
TTCGACGCTC TCGCTGGGCT GCATTCCCGC ATCACCGTTC CGGTCCAACT GGTCTGGGGT
GCCGACGACC CCTACTTCCC GGTGGCCTGG ACCCGCGCGA TGATGTCCGG TTTCCCGGGT
GACGTTCGCC TGCGCGAAGT CCGGCGCGGC AAACTCTTCG TCCACGAGGA GTTCGCCGAA
GAGGTCGCCG CCGCTCTCAC CCCCACGCTG ACCGCGCCTC GCCAAGGCTC AGGGAAGATC
CAGCCCTGA
 
Protein sequence
MPELTAAQAA DLFRARPDRF VDVGHGQVAV RSIGEGPDVL FVHGWPVSGA TFRSLLPFFV 
PHLRCHVIDL VGAGDSRFDR TARINIAAQS AAVRRVVDTL ALDEVAVVGH DSGGLIARHA
LAGDPRVRSW GLIDTEQPQG AHWRLSLLFA TRHLPGFERL LTVASNIRPL RRNRFVLGDA
FHDRDLLDGD FAEFFLRPLK ESADRRWAFG QFPRNFDFSA FDALAGLHSR ITVPVQLVWG
ADDPYFPVAW TRAMMSGFPG DVRLREVRRG KLFVHEEFAE EVAAALTPTL TAPRQGSGKI
QP