Gene Strop_4323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4323 
Symbol 
ID5060808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4895860 
End bp4896465 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content74% 
IMG OID640476585 
Productregulatory protein, TetR 
Protein accessionYP_001161129 
Protein GI145596832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0245964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGGCA CATCGACCCG CGTCCCACAG CAGGAGCGCA GCCGCGCCAC CCAGACCCGG 
CTGCTCGAGG CCACCGTGGC CTGCCTGGTC GAGCACGGCT GGTCGGGCAC CACAACGACC
GTCGTGGCGA CCCAGGCCGG GGTGTCCCGG GGCGCCCAAC TTCACCACTA CCCCACCAAG
GCAGCCCTGG TCACCGCCGC GGTCGCGCAC CTCGCCGAGC GGCGCGCGGA GGAGCTGCGC
GCCGAGGCGA AGACCCTGCC CGCCGGTCCA CAGCGGTTGG ACCGGGTGGT TGACCTGCTC
GCCGCGGCCT TCACCGGACC GCTCTTCGTG GCCGCCCTGG AGCTGTGGGT CGCCGCCCGC
ACCGACCGCG AACTACGGGC GGCGCTGGTG CCGCTGGAAG CCCGACTCGG CCGGGAGATG
CACCGACTGA CCGTCTCCCT GCTCGAGGTC GACGAGCGTC GACCCGGCGT ACGGGAGGCG
GTGCAGGCCA CCCTCGACCT GCTCCGCGGC CTCGGCGTGG CCAACCTGCT CAACGACGAC
TCGACCCGCC GCGCCGCACT GCTCACCGCC TGGAAACGCC AACTCACCGA GCTCCTCGCC
CCCTGA
 
Protein sequence
MSGTSTRVPQ QERSRATQTR LLEATVACLV EHGWSGTTTT VVATQAGVSR GAQLHHYPTK 
AALVTAAVAH LAERRAEELR AEAKTLPAGP QRLDRVVDLL AAAFTGPLFV AALELWVAAR
TDRELRAALV PLEARLGREM HRLTVSLLEV DERRPGVREA VQATLDLLRG LGVANLLNDD
STRRAALLTA WKRQLTELLA P