| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4286 |
|---|
| Symbol | |
|---|
| ID | 5060771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4855478 |
|---|
| End bp | 4856644 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640476548 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_001161092 |
|---|
| Protein GI | 145596795 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.145773 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.872647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGCA TGACCACGGA CGCCGATCTC CGCGAACTGA CCGTCGGCAC CGGCGCCGGT
GGGGAGCAAC TCGGCACGGA CATGGTGCTC AACATCGGTC CGCAGCACCC CTCGACGCAC
GGAGTACTCC GGTTGCGGCT GGTGCTCGAC GGCGAACGGG TGGTGAGCGC CGAACCGGTC
GTCGGCTACA TGCACCGGGG CGCGGAGAAG CTGTTCGAGG TCCGCGACTA CCGGCAGATC
ATCGTGTTGG CGAACCGACA CGACTGGCTC TCGGCGTTCG CCAACGAACT CGGCGTGGTG
CTCGCCGTGG AGCGGCTGCT GGGGATGGAG GTTCCGGAGC GGGCCACCTG GCTCCGGATG
GCGCTCGCCG AGCTGAACCG GGTCCTCAAC CACCTGATGT TCCTCGGGTC GTACCCGCTG
GAGATCGGGG CGATCACCCC GATGTTCTAC GCCTTTCGGG AACGGGAGAC ACTCCAGACG
GCGCTCGAGG AGGTCTCCGG CGGGCGGATC CACTACATGT TCAACCGGGT CGGTGGGCTC
AAGGAGGAGG TGCCGGCCGG CTGGACCGGG CGGGCCCGGG CGGCTATCGG CGAGGTCCGG
CGGAGCCTGC CCGACCTGGA CAACCTGATC CGGCGAAACG AGATCTTCCT GGCCCGTACC
GTCGGCGTCG GGGTGCTCTC GGCGGCCCAG GCCGCCGCGT ACGGCGCCTC TGGACCGGTC
GCCCGCGCCT CCGGCCTCGA CCTCGACCTA CGCCGGGACG AGCCGTACCT GGCGTACGAC
CAGCTCGACG TGCCGGTGGT GACCCGCACC GCCGGGGACT GTCACTCCCG CTTCGAGGTG
CTACTCGACC AGGTGTACGT CTCGCTGGAC CTCGCCGAGC AGTGCCTGGA CCGGGTGGAC
CGGCTAACCG GGCCGATCAA CACCCGGCTG CCGAAGGTGC TCAAGGCACC CGAGGGGCAC
ACCTACGCCT GGACCGAGAA CCCGCTCGGT ATCAACGGGT ACTACCTGGT GTCCCGGGGT
GAGAAGACGC CGTGGCGGCT GAAGCTACGC ACCGCGTCCT ACGCCAACGT GCAGGCGCTG
GCCACCCTCC TGCCCGGTTG CCTGGTGCCG GACCTGGTCG CCATCCTCGG CTCAATGTTC
TTCGTGGTCG GCGACATCGA CAAGTGA
|
|---|
| Protein sequence | MTGMTTDADL RELTVGTGAG GEQLGTDMVL NIGPQHPSTH GVLRLRLVLD GERVVSAEPV
VGYMHRGAEK LFEVRDYRQI IVLANRHDWL SAFANELGVV LAVERLLGME VPERATWLRM
ALAELNRVLN HLMFLGSYPL EIGAITPMFY AFRERETLQT ALEEVSGGRI HYMFNRVGGL
KEEVPAGWTG RARAAIGEVR RSLPDLDNLI RRNEIFLART VGVGVLSAAQ AAAYGASGPV
ARASGLDLDL RRDEPYLAYD QLDVPVVTRT AGDCHSRFEV LLDQVYVSLD LAEQCLDRVD
RLTGPINTRL PKVLKAPEGH TYAWTENPLG INGYYLVSRG EKTPWRLKLR TASYANVQAL
ATLLPGCLVP DLVAILGSMF FVVGDIDK
|
|---|
| |