Gene Strop_4150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4150 
Symbol 
ID5060634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4723726 
End bp4724616 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content69% 
IMG OID640476412 
Producthypothetical protein 
Protein accessionYP_001160957 
Protein GI145596660 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGA TCGGCGTGGT CCTGCCCCAA GGCGAGCTGC ACGGCGGGCC ACGAGCCCTA 
CGCGAGTATG CGAGCGTGGC GCAGGAGCTG GGATTCCGGC ACCTCCTCGC GTATGACCAC
GTGCTCGGTG CCGACCCAGC CGGGCATCCG AACTGGCAGG GTGTATACGA CGCGGATGAT
CCGTTCCACG AGCCGCTGGT GCTCTTCGGC TACCTCGCGG CGGTGTGCGA CCTCGACCTG
GTGACCAGTG TTCTGGTCCT GCCGCAACGA CAGACCGCGC TGGTCGCCAA GCAGGCGGCC
GAGATCGACC TTCTCTCCGA CGGCCGGCTA CGGCTGGGGG TTGGCATCGG CTGGAACACG
GTGGAGTACG AGGCTCTGGG CCGGCCCATG CAGTCTCGAG GTGAGCGGCT CGACCAGCAG
ATCACCCTGT TGCGGTCACT ATGGACACAC CGGTCGGTCA GCTTCGAACA CTCCGGGGAA
CGAATCGTCG CGGCCGGGAT CAACCCACGA CCGAAACGGC CGATTCCCAT CTGGATTGGC
GGCGCCAGCC CAGCTGCCTA CCGCCGGGCG GGTCGTACCG GCGACGGCTG GATGCCCCGC
CTCCAGCCCG GGCCGGAGCT CACAGCGGCC CGAATGATCG TGACGAAGGC GGCGGAGGCA
GCCGGTCGAC CCCCCGAGGC GATCGGCATG CACGGCCGGG TCCGCTACCT CGACGGCGGC
GCGGTCGGTG TTGCCGCAGC GGCCCGCCGG TGGCGTGAAG CCCACGCCAC ACACCTGGCC
GTGAGCACGC TCGGCGCCGG ATTCACGTCG CTCAGCGAAC ACCTCGAAGC GCTCACCGCG
ATCGCCCGCA CGGGACTCCT CGACGAGAAC ATGGAAGGGC CCAATCGATG A
 
Protein sequence
MMEIGVVLPQ GELHGGPRAL REYASVAQEL GFRHLLAYDH VLGADPAGHP NWQGVYDADD 
PFHEPLVLFG YLAAVCDLDL VTSVLVLPQR QTALVAKQAA EIDLLSDGRL RLGVGIGWNT
VEYEALGRPM QSRGERLDQQ ITLLRSLWTH RSVSFEHSGE RIVAAGINPR PKRPIPIWIG
GASPAAYRRA GRTGDGWMPR LQPGPELTAA RMIVTKAAEA AGRPPEAIGM HGRVRYLDGG
AVGVAAAARR WREAHATHLA VSTLGAGFTS LSEHLEALTA IARTGLLDEN MEGPNR