| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4112 |
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| Symbol | |
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| ID | 5060594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4675370 |
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| End bp | 4676851 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476373 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001160920 |
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| Protein GI | 145596623 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.965802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGGCCC GCGAGCCCCG TTCCGAGCCG GCGCCGGTGG GCGCGGGGTC GCGCGGACGG
GCCCGGCGGT GGCTGGTAGC CGCGGTCTGC CAGGTGGTCG TATTCCTCGG GACGGCCACC
ACCGCGATGT TGGCCATCGC GGTACCTCAG ATCACGTCGA CCCTGGGCCT CGGCGAGGAC
GGCCAGCAGT GGATGGTTGC CGGCTACGCG CTGGCGTACG CCCTGATGTT GGTACCCGGC
GGTCGGCTCG GTGACGTGTG GCGACGGCGC GTCGTCTTCG TCTCCAGCCT GGTGCTCAAC
GGGCTGGCGG CCATGTCCGC CGCCCTTGCG CAGACGCCGG TCTGGCTGGT GCTCTCCGTG
TTGGTGCAGG GCGGTGCCCT CGGGGTGGTC AGCCCTCAGG TCCTTGGGCT TTTCCAGCAG
TTGTTCAACA AGGAGGAGCG GGGCCGTCCA TACGGTCTGC TCGGGGTGGC GTTCGCCGTC
GCCCTCGGAG CCGGACCGGT CCTGGGCGGG GCGCTGGTCG ACGTCAGCCC GGAGAACGGC
TGGCGGCTGG TCTTCGTCGT GAGCGCCTCG ATCGCTTTCC TGGCAGCTGC CCTGGGGTTT
CTCCTGATAC CCGCGTCGAC GACACCCCCG GATCGTTTCT GGTGGCGACG GACGGACCCG
GTGGGCATCG TCTTGTTCGT CGTCGGGATG GTGGCGCTCT GGATCCCGAT GGTGCAGGAG
GCGGCATGGG GCCCTGTTCT GGGGGTGCTG GCGCCGGTCG GCGTGGTCGT TCTCGCCGGC
TTCGTGTTCT GGGAGCGGCG TCAGGTGAAA CGGGGGTCGC CGCTGGTTGA CCTGAGCCTG
CTGCGGGTCC GGTCGTACGG TCTGGGCGCG GTCATCGCGG TGTTGTTCGG CGCCTATGAC
GCGCTGTACT ACGTATTCGC GCTGTATCTG CAGGATGGGG TGGGCCACAG CCCGCTCACC
ACCGGTCTCG TGATGGTGCC GATTGCCGGG GGCACCGCGG CGGGGGCGGT CGTCGGGGGT
CGGCTGGCCT GGCGGGCAGG TCGCCGAATA GTAGCCGTCG GACTGCTGAC GTCCTTGGTC
GGACTGGCGG CGGTCATGGT TGGTGACCTC TTCCTGCCGA CCTTCGGCAG CCCGCACTCG
GCGGCCCTGC CACTGCTGCT TGCCGGTCTC GGCGCGGGCT TCGTCCTCAG CGGCATGGGC
AGCGGACTGA CCAACATCCC GAACCAGGCC GTGACCATGT CACAGGTATC CAGTACGCGG
GCCGGCAGCG CTGCCGGGAT GTTGCAGACC GGGCACCGGC TTGGAATCTC GGCCGGAACG
GTCGGCGTCA GCACCGCACT GTTCGCAACG TTGGACCGTA CCGGCGGTAA CTGGTTGGCG
GCCTTCCGGA CCACCTTGTT GATCATCGTG GCGTGCGTCC TCGTCGCACT CCTGATCGCC
CTGATGGACA TCTTCACCAG AAAGGAGGGG GCAGCTCGGT GA
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| Protein sequence | MTAREPRSEP APVGAGSRGR ARRWLVAAVC QVVVFLGTAT TAMLAIAVPQ ITSTLGLGED
GQQWMVAGYA LAYALMLVPG GRLGDVWRRR VVFVSSLVLN GLAAMSAALA QTPVWLVLSV
LVQGGALGVV SPQVLGLFQQ LFNKEERGRP YGLLGVAFAV ALGAGPVLGG ALVDVSPENG
WRLVFVVSAS IAFLAAALGF LLIPASTTPP DRFWWRRTDP VGIVLFVVGM VALWIPMVQE
AAWGPVLGVL APVGVVVLAG FVFWERRQVK RGSPLVDLSL LRVRSYGLGA VIAVLFGAYD
ALYYVFALYL QDGVGHSPLT TGLVMVPIAG GTAAGAVVGG RLAWRAGRRI VAVGLLTSLV
GLAAVMVGDL FLPTFGSPHS AALPLLLAGL GAGFVLSGMG SGLTNIPNQA VTMSQVSSTR
AGSAAGMLQT GHRLGISAGT VGVSTALFAT LDRTGGNWLA AFRTTLLIIV ACVLVALLIA
LMDIFTRKEG AAR
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