| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3990 |
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| Symbol | |
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| ID | 5060471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4542417 |
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| End bp | 4543736 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640476250 |
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| Product | hypothetical protein |
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| Protein accession | YP_001160798 |
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| Protein GI | 145596501 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATC AGCGTCACAC GACCAGATCC AACCCGGAGC ATCGCAACGG AGGTCAGGCG
AGGTCACGAT GGTGGGCTGC CGGGCTGGCC GGAGCGACCG GCCTGGCGCT TACCGCCGCT
GCCGTCACCA CCCTCACCGC CGCCCCCGGC GGCGAGGGTG TCGGACACGC TGCCGTCGTC
GATGACCAAC TCGGGCAGCC GAAGGGTACG CGGGTGCCCT GTGACACGAG TCGGCTGATC
GCCGAGATCA CCCGAGCCAA CGCCCGGGGT GGTGCCGTGC TCGACCTTGC CGAGGGCTGT
ACCTACCTGC TCACCGCTGA CCTCGACGGT GCCGGCCTGC CGGCGATCAC CACTCCCATC
ACCCTCAACG GCGGAAAGAA CACCACCCTC AAACGCTCCG CCGCGGCCGA CGACTTCAGA
ATCCTCACCG TCAACGCCAA CGGTCGACTC ACCCTTAATC ACCTCACCGT CACCGGTGGG
CGGCTCTCTG GTGACAACGA CGGCGGCGGG ATTCTCATCA ACCCAGGTGG CGGTGCCACA
GTCAGGAAGA GTAAGATTGT CGAAAATGTA TCCAGTGGCG GCGACGCCGG CGGGATCGCG
AACATTGGCG GCGTGCTCCA TATCGAACAC TCCGACCTCA GTCGAAATGC TGCTGCTAAT
ATCGGCGGCG GGATCTTCAG TATCGGTACA CTCGCCATCG ACAAGTCGCG GCTCGACGCG
AATACTGCGC TGACTGGCGG TGCTCTCACG ATCAGTGGTC AGTTGACCGT TACCCGGAGC
GAGTTGGTCG GTCATCAAGC CTCCGAGGGG GGAGCTATTT TCCTCCTCGG TGGGGTGACC
GGGACTATCG CCGACACCCG CATCGAGGAG AACACGACAA CGGGCTTCGG CGGTTCCGCT
GTCGCCGGTG GGCCCCTCCA GCTCACCATG TCCCGGGTCA CCATCGCGGC CAACACCGCA
GCCGGCACCG GCCAGAGTGC GATCTTTCTG CAAGGGGGAG CCCTGCTCGT CGAGGACAGT
GTCATCAAGG ACAATGTCGG AGTCAACGGT GGTGGCATTC ACAATCTCGG CACGTTGACG
CTTCTGCGTA CAAAGGTCAC CGGTAATCAG GCCACCGAGT CGGGCGGCGG CATCTTCAAC
GGATCGGTCG GCGCGCTCAC CCTGCTGCGC ACGAAGGTTG TCGAGAACGT CGCCGGCACC
GACGGCGGCG GCATCTTCAA CGAGATCGGC GGCACGGTTG ATCTCTCCAG TGCTACCGGC
ACCACTGTGG TCAAGAATCG ACCAGACAAC TGCGTGAACG TTCCCACGTG CCAGGGCTGA
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| Protein sequence | MNHQRHTTRS NPEHRNGGQA RSRWWAAGLA GATGLALTAA AVTTLTAAPG GEGVGHAAVV
DDQLGQPKGT RVPCDTSRLI AEITRANARG GAVLDLAEGC TYLLTADLDG AGLPAITTPI
TLNGGKNTTL KRSAAADDFR ILTVNANGRL TLNHLTVTGG RLSGDNDGGG ILINPGGGAT
VRKSKIVENV SSGGDAGGIA NIGGVLHIEH SDLSRNAAAN IGGGIFSIGT LAIDKSRLDA
NTALTGGALT ISGQLTVTRS ELVGHQASEG GAIFLLGGVT GTIADTRIEE NTTTGFGGSA
VAGGPLQLTM SRVTIAANTA AGTGQSAIFL QGGALLVEDS VIKDNVGVNG GGIHNLGTLT
LLRTKVTGNQ ATESGGGIFN GSVGALTLLR TKVVENVAGT DGGGIFNEIG GTVDLSSATG
TTVVKNRPDN CVNVPTCQG
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