Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3854 |
Symbol | |
ID | 5060332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4412957 |
End bp | 4413658 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640476111 |
Product | uracil-DNA glycosylase |
Protein accession | YP_001160662 |
Protein GI | 145596365 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACG ACGCACCCAC CCTGGATCTG CTGGCCCTGC TGCCGCCGGG GTGGCGGTCC GCGCTCGCCC CGCAGCTCGA CCCGGCCCGC ACCGCGGCGC TCGCCGGCTT CGTCGCGCAG GAATACACCA CCCAGACCAT CTTTCCGCCC GTTGCGGATC TCTTCTCGGC CTACCAGCTC TGCCCGCCGA CGGACACCCG GGTGGTGATC CTCGGCCAGG ACCCCTATCA CCGGGCCGGG CAGGCGCACG GGCTGAGCTT CAGCGTCCGC GCGGGGATGG CGACGCCGCC GTCACTGCGC AACGTCTTCA AGGAACTCGG CGCCGACCTG GGCGTGCCGA GGCCGGCCGG TGGAAACCTC GGCGGCTGGG CCGCGCAGGG TGTGCTGCTG CTCAACTCGG TGCTGACTGT CCGCGAGGCC AGCCCCGGCT CTCACGCCAA CCGCGGCTGG GAGGAGTTCA CCGACGCGAC GATTCGGGCG CTGGACGCGG TGGAGCACCG GGTGGTCTTC CTGCTCTGGG GCGGGTATGC CCGGAAGAAA GCGGCTTTGG TGACGAACCC CAGCCACGTG GTGCTGGAGG CGGGACATCC CAGCCCGATG AACCCACGGG GGTTCCTGGG CAGCCGCCCG TTCAGCGCGG CCAACAAGGC ACTCGCCGAC GCCGGCCTTC CGACGATCGA CTGGGAACGC GCCGCCGGCT GA
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Protein sequence | MPDDAPTLDL LALLPPGWRS ALAPQLDPAR TAALAGFVAQ EYTTQTIFPP VADLFSAYQL CPPTDTRVVI LGQDPYHRAG QAHGLSFSVR AGMATPPSLR NVFKELGADL GVPRPAGGNL GGWAAQGVLL LNSVLTVREA SPGSHANRGW EEFTDATIRA LDAVEHRVVF LLWGGYARKK AALVTNPSHV VLEAGHPSPM NPRGFLGSRP FSAANKALAD AGLPTIDWER AAG
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