Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3816 |
Symbol | |
ID | 5060294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4371271 |
End bp | 4372122 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640476074 |
Product | peptidase M23B |
Protein accession | YP_001160625 |
Protein GI | 145596328 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGAACG ACACCCCCCG CTCGAGCAGG AACACCGCAC CGGCCCGCCA CCGGCGACCG ACCAGCACCC GAGGCCGGGT GCTGCGCGCC ACAGTCGCCG CGGTAGCCGG ACTCGCCCTC ACCGGAGTCG CGGTAACAGC GATCACCGGA GATGACCAGG ACGCCGCACG GAACGGTGCC GTCGACATCG ACCTGCGGAC TCAGACCGAG GCCCGGGCCC AGGCCGAAGC CGCCGCCCAA GCCGAAGCCG CCGCCCAAGC CGAAGCCGCC GCCCAAGCCG AAGCCGCCGC TCGCGCTGAA GCCGCCGCCC GCGCCGATCG CTCCGCCCGG GAGTCGGCGA GCAGCAGTCC GACCCCCAGC GCGTCGGCGA GCCCCACGGA GCGGCCCTCG GTCAGCGCGA CACCGAAGGT GACGGCCAAG CCGGCAACCA CGACAACCAC CGCGTCGACG CCGACCTGGG TCATCCCCAT GGCCGATGCC ACCATCACCT CCTGTTACGG ATCGCGGTGG GGAATGCTGC ACGCCGGTAT CGACTTCGCC ATGCCCGCCG GCACCCCGGT CCACGCCGCC TTCGGCGGCA CCGTGACGAA GGCCAGCGAC GCTGGCGACG GGTACGGCAT CTCGGTCATC ATCGACCACG GCAACGGATA TCTGACCCAC TACGCCCACC TCAGCACCGC GAAGGTAAGC GTCGGCGGCC AGGTCGGTGC CGGTGACCCC ATCGGTCTGG AGGGCTCCAC CGGCGACTCC ACCGGCCCGC ACCTGCACTT CGAGGTACAC CAGGGTCAGC TGTGGAACCA GATCGACCCG GCGCCTTTCC TCCGCGAACG CGGCATCGAC GTGGCCTGCT GA
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Protein sequence | MQNDTPRSSR NTAPARHRRP TSTRGRVLRA TVAAVAGLAL TGVAVTAITG DDQDAARNGA VDIDLRTQTE ARAQAEAAAQ AEAAAQAEAA AQAEAAARAE AAARADRSAR ESASSSPTPS ASASPTERPS VSATPKVTAK PATTTTTAST PTWVIPMADA TITSCYGSRW GMLHAGIDFA MPAGTPVHAA FGGTVTKASD AGDGYGISVI IDHGNGYLTH YAHLSTAKVS VGGQVGAGDP IGLEGSTGDS TGPHLHFEVH QGQLWNQIDP APFLRERGID VAC
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