Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3815 |
Symbol | |
ID | 5060293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4370284 |
End bp | 4370997 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640476073 |
Product | peptidase M23B |
Protein accession | YP_001160624 |
Protein GI | 145596327 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCAGC GCCTGTCGTC TGAGCCCGAT AGATATCGCG GCCGTCGCCG CGTACCCACC CCACCGCGGA GCCGCTACGC CGCCGTGGTC ACCACCGCTC TCGTTGGTGC CGGCGGAGTC GCACTCTTCG CCGGCAACGC CCTTCCCGAC GCCAAGAGCG TCAGCCCGAC CGTCCTGGCC GAGCTGAAGA CGGCCTCCGC GCTGAGCGAG GACGCCGCCG AGCGCGCCAA CGCCGCCGAC CGCTCGTCAC GGGACGGCGA GCGCGTCGAC GCGGCGGCGG AGGCAGAAGT CTGGTGCCTC CCCCTCAAGG AGTACGAGTT CAACTCCCCG TACGGCGTTC AGGGTGAAGA GCTCCACACC GGCGTGGACC TGGTTGCCCC GGAGGGCACC CCCTACGTCT CCATTCATGA CGGCACCGTC ACCAAGGCCG GCTGGTTCGG CGGGTACGGA TACACGGTGA TCGTCGCGAA CGCCGACGGC AGCGAGGCCA TCTACGGGCA CTCCTCCGAA CTCAGCGTGC AGGAGGGCCA GGAGGTGAAG GCCGGCGACC AGCTCGGCCT GGTCGGTAAC ACCGGCCTCT CCTACGGCTC CCACCTGCAC CTGGAGGTCC ATGTCAAGGG CGAACCGCTC GACCCGGTCC CCTGGTTGAT GGAGCGCGGA GTGGACATCA AACTTCAGAT GGAACCTTTC CACAGCGAGG TAGCCATCCC CTGA
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Protein sequence | MRQRLSSEPD RYRGRRRVPT PPRSRYAAVV TTALVGAGGV ALFAGNALPD AKSVSPTVLA ELKTASALSE DAAERANAAD RSSRDGERVD AAAEAEVWCL PLKEYEFNSP YGVQGEELHT GVDLVAPEGT PYVSIHDGTV TKAGWFGGYG YTVIVANADG SEAIYGHSSE LSVQEGQEVK AGDQLGLVGN TGLSYGSHLH LEVHVKGEPL DPVPWLMERG VDIKLQMEPF HSEVAIP
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