Gene Strop_3815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3815 
Symbol 
ID5060293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4370284 
End bp4370997 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID640476073 
Productpeptidase M23B 
Protein accessionYP_001160624 
Protein GI145596327 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCAGC GCCTGTCGTC TGAGCCCGAT AGATATCGCG GCCGTCGCCG CGTACCCACC 
CCACCGCGGA GCCGCTACGC CGCCGTGGTC ACCACCGCTC TCGTTGGTGC CGGCGGAGTC
GCACTCTTCG CCGGCAACGC CCTTCCCGAC GCCAAGAGCG TCAGCCCGAC CGTCCTGGCC
GAGCTGAAGA CGGCCTCCGC GCTGAGCGAG GACGCCGCCG AGCGCGCCAA CGCCGCCGAC
CGCTCGTCAC GGGACGGCGA GCGCGTCGAC GCGGCGGCGG AGGCAGAAGT CTGGTGCCTC
CCCCTCAAGG AGTACGAGTT CAACTCCCCG TACGGCGTTC AGGGTGAAGA GCTCCACACC
GGCGTGGACC TGGTTGCCCC GGAGGGCACC CCCTACGTCT CCATTCATGA CGGCACCGTC
ACCAAGGCCG GCTGGTTCGG CGGGTACGGA TACACGGTGA TCGTCGCGAA CGCCGACGGC
AGCGAGGCCA TCTACGGGCA CTCCTCCGAA CTCAGCGTGC AGGAGGGCCA GGAGGTGAAG
GCCGGCGACC AGCTCGGCCT GGTCGGTAAC ACCGGCCTCT CCTACGGCTC CCACCTGCAC
CTGGAGGTCC ATGTCAAGGG CGAACCGCTC GACCCGGTCC CCTGGTTGAT GGAGCGCGGA
GTGGACATCA AACTTCAGAT GGAACCTTTC CACAGCGAGG TAGCCATCCC CTGA
 
Protein sequence
MRQRLSSEPD RYRGRRRVPT PPRSRYAAVV TTALVGAGGV ALFAGNALPD AKSVSPTVLA 
ELKTASALSE DAAERANAAD RSSRDGERVD AAAEAEVWCL PLKEYEFNSP YGVQGEELHT
GVDLVAPEGT PYVSIHDGTV TKAGWFGGYG YTVIVANADG SEAIYGHSSE LSVQEGQEVK
AGDQLGLVGN TGLSYGSHLH LEVHVKGEPL DPVPWLMERG VDIKLQMEPF HSEVAIP