Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3786 |
Symbol | |
ID | 5060264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4339001 |
End bp | 4340905 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640476044 |
Product | ABC transporter related |
Protein accession | YP_001160595 |
Protein GI | 145596298 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACG GTAACGAGCC AGGCGGTGAC CCGTTGCCGG CCGTCCCAGT GCCGCGACCA CGGTCGGCCC AGGAAAACTG GCGCGGCATC GCGGTCGACC CGGACGCCGA CCGCAGCCGG GCCGAGGACA CCGATCCGGC GGCGGTGGCC CGGCTGCGCG CCCGCAGCCG GGTGCTGCTG CGCGACCTGC TCCACCCGCA CCGCCGACAG CTCGCCGTCG CCGTCGCGCT GCTGCTCATC CAGAACGTGG CGAGCATGGC CGGACCGTAT CTGGTGATGC TCGGCATCGA CCGGGCCATT CCGCCGCTGC GGGCCGGCGA CACCCGGCCA CTGACGTACA TCGCCGCCGC GTTCGTCGTC GCCACGGTCG CCGAGTACAC CGCCCGCCGC GGCTTCCTCG CCCTCTCCGC CCGGATCGGT CAGGCTGTGC TCCTCGACCT CCGACGCCGG GTGTACGGAC ACTTCCTACG CCTGTCGGTG GCCTTCCACC AGCGGTACAC GTCCGGGCGG ATGGTCTCTC GGCTCACCAG CGACCTGGAC TCCATCGGCG AGTTGGTCGG CGGTGGCATC GACAGCCTGG TCCTCGCTGC CCTGTCGATC CTGTCGGTGG CCGCGATCCT GCTCTGGCTG GATCTCCCGC TGGCCGCCGT GACGCTGCTG GCGTTCCCGT TCCTGTACTG GCTGTCCCGC TGGTTCGCCC GCACCTCGGC CGTGGCGTAT CGGTGGACCC GGGACACCAT CGCCCTGGTC ATCGTGCATG CCGTCGAGTC GCTGCGGGGG ATCCGGGCAG TGCAGGCGTT CCGCCGCGAG CCGCGCAACC AACGGATCTT CGTCCGGGTC AACGACGACT ACCGGCGGGC CAGCCTGCAC GCGTTCCAGC TGATCGCCAC CTACTCGCCC GGGGTCAAGC TGATCGGGAA CGTCACCATC GCGGTGGTGC TCTGCTACGG CGGATGGCGC GTCCTCAATG GTCACGCCGA GGTTGGGGTG CTCGCCGCCT TCCTGCTCTA CCTGCGTCGG TTCTTTGAGC CGATGCAGGA GCTGAGCCAG TTCTACAACT CGTTGCAGTC GGCCACCGCA GCGCTGGAGA AGCTCGCCGG TGTGCTGGAC GAGCAACCTG AGGTACCGGA GCCGGCCCGG CCGGTGCCGT TGCCGGCCCC CGAATCCGGT CGCGGGGCGG TCACCTTCCA CTCGGTCTCC TTCGGGTACT ACCCGCAGTC CCCGATCCTG CACGGACTGG ACCTGGACAT CCCGGCCGGG CAGACCGTCG CACTGATCGG GGCGACCGGC GCCGGCAAGT CGACCATCGC CAAACTGCTC GCCCGTTTCC ACGACCCGAA CACGGGCACC GTCGCGCTGG GGGGCGTGGA CCTGCGGGAC ATCGCCGACG CCGACCTACG CCAGGCGCTC GTATTGGTCA CTCAGGAGAC CCACCTCTTC GGCGGGACCG TCGCGGAGAA CATCCGTTTC GGCCGGCCGG ACGCGGACGA CGCCGCGGTG GCGGCAGCGG CGAAGGCGAT CGGCGCGGAC GAGTTCATCA CCGCCCTGCC CGACGGGTAC GCCACCCAGG TGCATCGCCG CGGCAGCCGG CTCTCGGCCG GTCAGCGGCA GCTCGTCGCG TTCGCTCGGG TGTTTCTGGC CGACCCGGCG GTGTTGATCC TCGACGAGGC GACCTCGTCC CTCGACGTCC CGACCGAACG AGCGGTCCAA CGGGCCCTGG CCACCATTCT GCGCGACCGT ACCGCGCTGG TGATCGCGCA CCGACTCTCC ACCGTCGAGA TCGCCGACCG CGTGCTGGTG CTGGAGTCGG GACGGATCGT CGAGGACGGC TCACCCGCGC GACTGGTCCA CCGCGACGGG CGGTACGCCG AGCTGCACCG CCAGTGGCTG GACTCCCTGA GCTGA
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Protein sequence | MTDGNEPGGD PLPAVPVPRP RSAQENWRGI AVDPDADRSR AEDTDPAAVA RLRARSRVLL RDLLHPHRRQ LAVAVALLLI QNVASMAGPY LVMLGIDRAI PPLRAGDTRP LTYIAAAFVV ATVAEYTARR GFLALSARIG QAVLLDLRRR VYGHFLRLSV AFHQRYTSGR MVSRLTSDLD SIGELVGGGI DSLVLAALSI LSVAAILLWL DLPLAAVTLL AFPFLYWLSR WFARTSAVAY RWTRDTIALV IVHAVESLRG IRAVQAFRRE PRNQRIFVRV NDDYRRASLH AFQLIATYSP GVKLIGNVTI AVVLCYGGWR VLNGHAEVGV LAAFLLYLRR FFEPMQELSQ FYNSLQSATA ALEKLAGVLD EQPEVPEPAR PVPLPAPESG RGAVTFHSVS FGYYPQSPIL HGLDLDIPAG QTVALIGATG AGKSTIAKLL ARFHDPNTGT VALGGVDLRD IADADLRQAL VLVTQETHLF GGTVAENIRF GRPDADDAAV AAAAKAIGAD EFITALPDGY ATQVHRRGSR LSAGQRQLVA FARVFLADPA VLILDEATSS LDVPTERAVQ RALATILRDR TALVIAHRLS TVEIADRVLV LESGRIVEDG SPARLVHRDG RYAELHRQWL DSLS
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