| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3748 |
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| Symbol | |
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| ID | 5060226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4292075 |
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| End bp | 4295509 |
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| Gene Length | 3435 bp |
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| Protein Length | 1144 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640476006 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001160557 |
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| Protein GI | 145596260 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG2887] RecB family exonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.355168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCAGC CGACCCTGTT CAGCGCGGCG ACCCCGACAC CCCGTACGGC CGATTCCGGG
CCCCGGTACA CCCCGGTCGA GTTGGCGAAG CTGCTGAGAC TGCCGGCACC CACCCGGGAA
CAGGCCGCGA TCATCGCCGC CCCGGTGGAG CCGTTACTTG TCGTCGCGGG CGCCGGTTCC
GGCAAGACCG AGACGATGGC CGCCCGGGTG GTTTGGTTGG TGGCCAACTC GTACGTCCAA
CCGGAGCAGG TGCTCGGTCT GACGTTCACC CGCAAGGCCG CCGGGGAGCT GGCGCACCGT
GTCCGGACCC GACTCGGTCA GCTCGTTCGC CGGCTCGGGC GCAACGGGCG TCACCCGCTC
GACGATCCGT TGTCCGGCGA GCCGACGGTC GCCACCTACC ACTCGTATGC CGGGCGGGTG
GTGACCGAAC ATGGGCTGCG CGCCGGCTAC GAGCCGGCCA CCCGGCTGCT CACCGAGGCG
TCCCGCTGGC AGCTCGTCGA CCTGATCGTG CGCACCTACG ACGGCGACAT GTCCGAGGTG
GACCGGATGC CGAGCACGGT CACCGACGCG GTGCTGGCCC TCGCCGGCGA GTTGGACGAG
CACCTGGTTG AGCCGGATCA CCTGTCGGCC TGGACCGGGC GGTTCTTCGC CGACGTGCAG
TCCCGCCCCG GCCGCGTCTA CGCCGACGTG CGTCGGGCTC TCACGCTCGC GCAGGTCCGG
TTGAAGCTGC TGCCGCTGGT CCGGGCATAT GCCCGGCGCA AGGAGGATTT CGAGGCGATG
GACTTCGCCG ACCAGCTCGC CCGGGCGGCC CGGGTCGCCC GGGATCACCC GGTGGTCGGT
GAGATCGAGC GGGATCGTTA CCGGGTGGTA CTGCTCGACG AATACCAGGA CACCAGCCAC
GCCCAGGTGG TGCTGCTGAA CGCGCTCTTC GGTGGCGGGC ACCCGGTGAC CGCGGTCGGT
GACCCCTGCC AGTCGATCTA CGGTTGGCGG GGCGCGAGCG CGGGCACCCT CGACCGGTTC
CGCACCGAGT TCGCCCAGAC CGATGGTGCT CCGGCCCAGG TCCGCACGCT GACCACCAGC
TGGCGTAACC GACCGGAGAT CCTCGGGGTG GCGAACGCCC TCGCCACCCC ACTCCGTGCC
GCCGGTGCCC GGGTGCCGGA GCTGCGTGCC GCGCTCAGCG TCAAGGAGCC GATCCCGCAC
CGCACCCCCC GCGGGTTCGC AGCCGGCACC GTCCACTGTG CGTTGTTGAG CACCTACGCG
GACGAGGCGG ACTGGATCGC CGACAGCCTG CTGCGCGCCT GGCAGGGGGC GGCGGGGACG
CCCGGCGTGA TGCCCGAACA CCTCCCGGTC GTGGCGCGCC CCACCACCGC GGTGCTGGTA
CGACTGCGCA GCCAGATTCC GGCGATCGAG TCCGCGCTGC GGGCCCGGGG CCTGCCGGTC
GACGTGGTGG GGCTGGGCGG CCTGCTGGAC ACGCCGGAGG TGCGGGATGT GGTCTGCACG
CTGCGGGTGT TGGCCGACCC GACCGACGGA GCGGCGCTGC TTCGGCTGCT GACCGGTGCC
CGGTGGCGGA TCGGGCCGCG GGACCTGGTG GCCCTACACC GTCGGGCCCG GGCCATCGCC
GCCGCGCGCC GGCAACTCGC GGCGGATGAC GAGCCGGAGA TCGTGCCGGA TGTGCTGGAC
GAGGCGACCC TGGTGGAGGC CCTGGCCGAT CTGGGGCCGG CGCCGGCGTA CTCGGCGGAG
GGCTATGCCC GGCTGCGTGC CGCCGCCCAG GAGCTGGGCC TGCTGCGCTA CCGGCTGGAC
CAGTCGCTGC CAGACCTCAT CGCCGACGTC GAGCGGACGA TCGGCCTGGA CGTGGAGGTG
GCGGTGCGTG CCGGCCGGGA CGGGGCTGGC GACGCCGGAC TGGCCCGGGG CCACCTGGAT
GCGCTCGGTG ACGTCGCGGC CCGGTTCAGT GGGGAGACGC CAGGTGCCAC ACTCTCGGCC
TTCCTCGCCT ATCTGGCGGC GGCGGAGGAC GAGGAGCGCG GGCTCGCCCC CGGTGAGGTA
GAGGTGGTCG AGGGGGCGGT GCAGGTCCTC ACCGCGCACG CGGCCAAGGG CCTGGAGTGG
GACGTCGTGG CGGTGGCCGG GCTCAGTCGC GGGGTGTGGC CGGGGCCGGT GCGCAACTCC
GATCACTGGT TGGGCGGGCT GGGGGTGCTG CCGTTCCCGC TGCGCGGCGA CGCCGACGGG
TTGCCGGTGT TGGCGCTGGC AGAGGCGGAG GAGCAGCGCG GGGTGGCGCA GGCCCTGGCG
GACTTCACCG CTGCATGGCG GGCGCACGAC GAGCGGGAGG AGCGGCGGTT GGCATATGTC
GCGGTGACTC GTCCCCGCCG GCTGCTGCTC TGCTCCGGGC ATTGGTGGGG GGAGGGCACC
AAACGCCCGC GCGGTCCCTC CGCGCTGCTC CGTGACGTGC ATCAGGCCTG CCTGAACGGC
GGCGCTGGGC AGGTGGTCGA CGAGTGGGCG GCGGAGCCCG CCCCGGACGC GGTGAACCCC
ACGACCGAGG TGGTGCTTCG GGCGGAGTGG CCGGCTGACC CGTTGGGCGC CCGACGGCCG
GTGCTCGCCG AGGCGGCCAC GTTGGTTCGA CGCTATCTGA CGGATGGGGT GCCGACCCGT
CCAGCGTCCG GCGGCGTGAC TGCGGCCGGC CCCCCGGTGC CGGGTGCGAG CGATTCGGTT
GCGGACGACC CGGGTGGCGA CGACCCGGAG GTGGTGCGTT GGCGCCGGGA GGCCGACCTG
CTGCTCGCCG AGCGGGCCGA GCTGACCCGG CAGGCTGGCC CGATCGAGGT CGCGCTGCCC
GCTGCGCTCT CGGTCACCCA ACTGGTGACG CTGCGACGGG ACCCGGCGGC CCTGGCGCGG
TCACTGCGCC GGCCCCTGCC CACCGAGCCG AACCCGTACG CTCGTCGGGG TACCGCCTTC
CATACCTGGC TGGAGCAGCG GTTCGGGGCT GGCCGACTGC TCGACGTGGA CGAGTTGCCC
GGTGCCGCGG ACGCGGACGC CGCGCCGGAT GAGGCGCTTG CCGAACTCCA GGAGCGCTTC
CTGGCCAGCG AGTGGGCGGA TCGGACGCCG GCCGAGGTCG AGGTGCCGTT CGCGACGGTG
ATCGCCGGAG TGGTCGTCCG GGGCCGGATG GACGCGGTTT TTGGCCGGCC CGGCGGCCGG
TTCGATGTGG TGGACTGGAA GACCGGCCGG CAGCCCACCG GAGCGGCCGC CGCCGCGGCA
GCGGTGCAGC TCGCCGTCTA TCGGCTGGCC TGGGCGGAGC TGGCGGGAGT CTCGGTTGCG
CAGGTGGGCG CGGCGTTCCA CTACGTCCGG GACGGGATGA CGGTGCGACC GGTGGACCTG
CTTGACGCGG CGGGTCTCAC CGCGCTGATC GCCTCGGTCC CGGAACGTGG GGCTGTGGAG
GCCACCGCTG GCTGA
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| Protein sequence | MNQPTLFSAA TPTPRTADSG PRYTPVELAK LLRLPAPTRE QAAIIAAPVE PLLVVAGAGS
GKTETMAARV VWLVANSYVQ PEQVLGLTFT RKAAGELAHR VRTRLGQLVR RLGRNGRHPL
DDPLSGEPTV ATYHSYAGRV VTEHGLRAGY EPATRLLTEA SRWQLVDLIV RTYDGDMSEV
DRMPSTVTDA VLALAGELDE HLVEPDHLSA WTGRFFADVQ SRPGRVYADV RRALTLAQVR
LKLLPLVRAY ARRKEDFEAM DFADQLARAA RVARDHPVVG EIERDRYRVV LLDEYQDTSH
AQVVLLNALF GGGHPVTAVG DPCQSIYGWR GASAGTLDRF RTEFAQTDGA PAQVRTLTTS
WRNRPEILGV ANALATPLRA AGARVPELRA ALSVKEPIPH RTPRGFAAGT VHCALLSTYA
DEADWIADSL LRAWQGAAGT PGVMPEHLPV VARPTTAVLV RLRSQIPAIE SALRARGLPV
DVVGLGGLLD TPEVRDVVCT LRVLADPTDG AALLRLLTGA RWRIGPRDLV ALHRRARAIA
AARRQLAADD EPEIVPDVLD EATLVEALAD LGPAPAYSAE GYARLRAAAQ ELGLLRYRLD
QSLPDLIADV ERTIGLDVEV AVRAGRDGAG DAGLARGHLD ALGDVAARFS GETPGATLSA
FLAYLAAAED EERGLAPGEV EVVEGAVQVL TAHAAKGLEW DVVAVAGLSR GVWPGPVRNS
DHWLGGLGVL PFPLRGDADG LPVLALAEAE EQRGVAQALA DFTAAWRAHD EREERRLAYV
AVTRPRRLLL CSGHWWGEGT KRPRGPSALL RDVHQACLNG GAGQVVDEWA AEPAPDAVNP
TTEVVLRAEW PADPLGARRP VLAEAATLVR RYLTDGVPTR PASGGVTAAG PPVPGASDSV
ADDPGGDDPE VVRWRREADL LLAERAELTR QAGPIEVALP AALSVTQLVT LRRDPAALAR
SLRRPLPTEP NPYARRGTAF HTWLEQRFGA GRLLDVDELP GAADADAAPD EALAELQERF
LASEWADRTP AEVEVPFATV IAGVVVRGRM DAVFGRPGGR FDVVDWKTGR QPTGAAAAAA
AVQLAVYRLA WAELAGVSVA QVGAAFHYVR DGMTVRPVDL LDAAGLTALI ASVPERGAVE
ATAG
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