| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3648 |
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| Symbol | |
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| ID | 5060123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4177383 |
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| End bp | 4178624 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640475903 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001160457 |
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| Protein GI | 145596160 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCCG TCCTCTCGGT CCTGCGTCGT AACCGGAACT TCCGCAAACT GCTCTTGGCC
GAGCTGATGG TCTTCGGCGT CGACTGGTTT GTCATGGTGC CGTTGCTGGT GCTCCTGCCG
GCGCTGACCG GCAGCGGCGT GTGGGGTGCG CTGCTGCTGG CGATGGACAC CGGCGTCGTG
GCGCTGCTGC TGCCGTACAC CGGGGCGCTG GCGGACCGGT TCGATCGCCG CCGGATCATG
ATCGGTGCCA ACATCGCCGC GCTGGTCGGC GTCCTGCTGC TCCTCGGCGT ACGCGATGCT
GGCACCGCCT GGCTGGCGTT GGTCGGGATC GGGGTGGTGG CGGTGGCCAA GGCGTTCTAC
TCGCCGGCCG CGCAGGCCGC CCTGCCGAAC GTGCTGGACC GGGACGAGTT GGCCGCGGGC
AATGCGGTCG CGGGTTCGGC GTGGGGCACG ATGACGATCG TCGGGGCATC GCTGGGCGGT
GTGCTGAGCA GCGTCACCGG ACCGTACGTC GCCTTCTGGG CAGCTGTCGG CGGTCTGGTT
CTGGCGGCGC TCCTGGCCGG GCTGATTCGC CGGCCGTTGC AGGCCCCCCG AGAGCGGGAC
CGGCCGGTAC AGCCGACGTG GGCGGCTATC CGGGAGGCAC TCGGCTACAT CGGCCATCGG
CCTCGGGTGC TGGCGTTGGT GACGGTTAAG TCGGCGGTCG GTCTTGGTAA CGGTGTGTTG
ACGGTCTTTC CCTTGTTGGC AGCGACCTAC GGGGCAGGCC CGATCGGCGC CGGACTGCTT
TTCGCGGTAC GTGGGGCGGG GGCTCTGGTT GGTCCGATCC TGATGCGACG GGTCCTGGGT
AACCGGTCCT GGCTGCTGCC GGGCCTGGCC CTGTCCATGT CGCTGTACGG GCTGGCCTAT
CTGGGCACCT CGGCGGTGAA CTGGTTCCCG CTGGTGCTCG TGTTGGTCTT TGTGGCGCAC
TTCGCCGGGG GGAGTAACTG GGTCATGTCC AACTACGCCC TCCAGGGGGA GGTGCCAGAC
CGGCTACGGG GGCGGGTCTT CGCTACCGAC ATGATGCTGG CTACCCTCGC TGTCTCGGTG
AGCCAGTTGG TGGTGGCCTC GGTGATCGAC GTGGTTGACG AACGGGTGGT GCTGGCCGGT
GGCGGCCTGG TCACCCTGGT CTACGCGATC GGCTGGCGGG TGGCGACCCG CCGCCTCTCG
CTGACCGAGC CGGCTGTCGA GCCGGAGTCG GCTCTGCGCT GA
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| Protein sequence | MPSVLSVLRR NRNFRKLLLA ELMVFGVDWF VMVPLLVLLP ALTGSGVWGA LLLAMDTGVV
ALLLPYTGAL ADRFDRRRIM IGANIAALVG VLLLLGVRDA GTAWLALVGI GVVAVAKAFY
SPAAQAALPN VLDRDELAAG NAVAGSAWGT MTIVGASLGG VLSSVTGPYV AFWAAVGGLV
LAALLAGLIR RPLQAPRERD RPVQPTWAAI REALGYIGHR PRVLALVTVK SAVGLGNGVL
TVFPLLAATY GAGPIGAGLL FAVRGAGALV GPILMRRVLG NRSWLLPGLA LSMSLYGLAY
LGTSAVNWFP LVLVLVFVAH FAGGSNWVMS NYALQGEVPD RLRGRVFATD MMLATLAVSV
SQLVVASVID VVDERVVLAG GGLVTLVYAI GWRVATRRLS LTEPAVEPES ALR
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