| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3590 |
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| Symbol | |
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| ID | 5060065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4104587 |
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| End bp | 4106011 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640475845 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001160399 |
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| Protein GI | 145596102 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0293443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTGG CCACCAGTGG TCCGGTGCGG CTGTGGGGCG GCAGCCCGGC GCACCGGTTC
TACAGCGTCG TGGTGTTCGT GCTGCTCGCC TCCCTGGACA ATGTGGCGAT CGGCCTGGTG
CCTCCGCTGT ATGGCTCGAT CGCCGACGCA CTCGATGTGT CGCGGCGGCT ACTCGGCCTG
GTCACCGCGG CCAACTTCCT GGTCAGTGCG GTGGCGGCGG TGGGCTGGGC CTACGTCGGG
GACCGCACCA ACCGTAAGCC GCTGCTCATG GTTGGCACGC TGATCTGGGC GTTCGGCACC
GGTGGCAGCG CGGTGGCGGA CAGCTATCCG ACCTTTCTGG CCGCCCAGGT GGTCGGTGCG
GTGGGGCTCG GCGCTGTTGG CTCGGTTGGC TTCTCGGTGG TCACCGACTT GATCTCACCT
CGCCGACGGG GTCTGGTGAT GAGCTTCTGG GGGCTGTCCC AGGGGGTCGG CACCCTGGCC
GGCACCCTGG TGGGCGGCCT GCTCGGAGCG GCGGACTGGC GACGTCCGTT CCTGGTGCTC
ACCGTCGTGG GGCTCGGTGC CACCGCGGCG TACCTGTTCA CCTTTGACAT TCGGCGCGGC
CAGAGCGAAC CGGAGCTGGC CGACCGGTTG GCCGGTGGCG CTGAGTACGA CCACCAGATC
AGCCGGGCTG ACCTGCCGCG GATTCTGGGC CGACGGACGA ATCGTTGGCT GATCTTGCAG
GGCCTCACCG CGCAGGCCGC GTTCGGCTCG CTGGTCTGGC TGCCGGTGCT CTTCGCCGAA
CGGGCCGAGG CTCAGGGCTA CTCGGCCGCG ACGGCGGTCG TGGTGGGCAG TGTCTTCGCC
ACCCTGTTCC AGCTCGGCGG GGTTTTCTCC ATCGTCGGCG GGTTGGTCGG CGATGCGTTG
CAACGTCGTA CCCCGTCCGG CCGGGCGACG GTCGCCGCGG TCGGAATCCT CGCGGCGCTG
CCGTTCTACC TGGTGCTCTT CTTCGTGCCG ATTCGCATTG ACGTCCCCGA CGGGGCCGGC
CCGGGCGCCA TCGTCCGGGC GGTGCTGGCG AGTGTGCTGA CCGAGCCGAC GGTCGGGCTG
AGTCTGCTCA CGGCGTTGCT GGCGCTTGCC CTGACCTCGG CCAACTCGCC GAACTGGTTC
GCCCTGATCG CCGATGTCAA CCCGCCGGAG CACCGCGGCA CCGTGTACAG TCTCGGCAAT
TTGGTCAACG GGGTTGGCCG GGCAGCCGGG AACGGACTGG TCGGGGTGGT GTTCCATGGG
CTGCGGGCGG CCTTCCCGCC GCCGTTGAAC TACGCGGTCG GGCTCGCCGT GTTCCAACTG
TTCTTCGTGC CAACCGGGGT CATGTATTGG CTCGCCGCCC GCAGCTCCCC GCGTGACATC
GCTGCGGTGC GAGTCCTGCT CCGCGCCCGT GCCAGGCGGA TGTAG
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| Protein sequence | MTLATSGPVR LWGGSPAHRF YSVVVFVLLA SLDNVAIGLV PPLYGSIADA LDVSRRLLGL
VTAANFLVSA VAAVGWAYVG DRTNRKPLLM VGTLIWAFGT GGSAVADSYP TFLAAQVVGA
VGLGAVGSVG FSVVTDLISP RRRGLVMSFW GLSQGVGTLA GTLVGGLLGA ADWRRPFLVL
TVVGLGATAA YLFTFDIRRG QSEPELADRL AGGAEYDHQI SRADLPRILG RRTNRWLILQ
GLTAQAAFGS LVWLPVLFAE RAEAQGYSAA TAVVVGSVFA TLFQLGGVFS IVGGLVGDAL
QRRTPSGRAT VAAVGILAAL PFYLVLFFVP IRIDVPDGAG PGAIVRAVLA SVLTEPTVGL
SLLTALLALA LTSANSPNWF ALIADVNPPE HRGTVYSLGN LVNGVGRAAG NGLVGVVFHG
LRAAFPPPLN YAVGLAVFQL FFVPTGVMYW LAARSSPRDI AAVRVLLRAR ARRM
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