Gene Strop_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3539 
Symbol 
ID5060013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4055810 
End bp4056394 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content70% 
IMG OID640475793 
Producthypothetical protein 
Protein accessionYP_001160348 
Protein GI145596051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.946203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTGGT GGTCGTGGCG CCCCGGTCCC GCTGACGGCG GTGAGCCGGG CAGCCGGAGC 
AGGGTCACAG TGGAGGAGGC GGTTCGGGTC AGCCCGCCGG CTCCCCGACA GCCGGGCGAC
AATTACGCGG GAGTCGACCG TCCCCCGGCC GTTGACGCAT CTGCCACGGT CGCACCGGTC
ACGCTCAGCC GGATCTGCGC CGCTCTGGAC GGGCTCGACG TGCGCTACCT GGCCGACGGC
GACGGAAACC TGCTGGCGAT GTGGGAAAGG CACGCGGTCC TGGTCGCGCT CGAGGGCCCG
GACGACGAGA TCCTGGTGCT GCGCGTTCGG CCGCATGCGA CCGTCCCGCC GGATTGGGAG
GATCGGGCCT ACCGGGTGGT CAACGAGTGG AACCACACCC GTCGCTTCTG CAAGGCATAC
ATCGGAGATC CGTCCGAACG CGGCCAGCTC CCCATCTATG CCGAGCTTCA GGTGCCGTTC
GCCGCTGGCG TGCACGACGC GCTCCTGGTC GAGATGCTCG ACTGCGGGGC GGCGGTAGCC
ACCAGCTTTG TTGACTGGCT GCACGACGAA GGGGCCCTGC TCTGA
 
Protein sequence
MPWWSWRPGP ADGGEPGSRS RVTVEEAVRV SPPAPRQPGD NYAGVDRPPA VDASATVAPV 
TLSRICAALD GLDVRYLADG DGNLLAMWER HAVLVALEGP DDEILVLRVR PHATVPPDWE
DRAYRVVNEW NHTRRFCKAY IGDPSERGQL PIYAELQVPF AAGVHDALLV EMLDCGAAVA
TSFVDWLHDE GALL