Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3521 |
Symbol | |
ID | 5059995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4039075 |
End bp | 4040160 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640475775 |
Product | amidohydrolase 2 |
Protein accession | YP_001160330 |
Protein GI | 145596033 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTACAC CGGTCATTGA TGTGCACTCG CACGCCGTAC CACGGGGTTG GCCGGACCTC GCTGCGGCCT GCGGTGGTTC TGGCTGGCCC TGGCTGCGGG TCGACTCCGA GCGCGCTGCG ATGATCATGG TCGGCGAGAT GGAGTTCCGC CCGGTCGGCG CGGAGTGCTG GGACCCGGCG ATCCGACTGG CCGACATGGC CGCCGACGGT GTCGACGTGC AGGTGGTCTC GCCGACGCCA GTCTTCTTCT GTTATGACCG CCCCGCCGCC CAGGCGGTCA AGGTGGCTCG GATCTTCAAC GACCGCATGG TGGAGATCAC GGCCAACGGG GGCGGCCGGC TGGTTCCGTT CTGCCAGGTG CCGTTGCAGG ACCCGGAGGT CGCCTGCGCC GAGTTGGACC GCTGTCTCGC CGCCGGGCAC GCCGGGGTGG AGATCGGCAA CCACGTCGGC GACCTCGACC TGGACGACAG CGGCATCGTC GAGTTCCTCA CCCACTGCGC CGAGGTCGGC GCGCCGGTCT TCGTCCACCC GTGGGACATG CCCGGCGGGC CACGGCTGGA TCGGTGGATG GCGCGGTGGC TTACCGGGAT GCCGGCCGAG ACCCACCTGT CGGTGTTGGC GATGATCCTC GGCGGGGTCT TCGACCGGGT GCCGGAGACG TTACGGATCT GCTTCGCCCA CGGCGGTGGC AGCTTCCCGT TCTGGCTGGG CCGCGCGGAC AACGCCTGGC ACCGCCGCGG GGACCTGGTC CGTGGTGCCT CGGCCCGGCC CCCCGGCTCG TACGTGGACC GGTTCTTCGT CGACTCGGTG GTGTTCGAAC CGGCGGCGTT GCGGCTGTTG GTCGACGCGA TGGGCGCTGA CCAGGTGCTG CTCGGCAGTG ACTATCCGTA CCCACTGGGG GAGCGGCCGG TCGGTACGGT TGTGCACCGG TCCGACTTCC TCACCCCCGA CCAACGCGCC GGCCTACTCG GCGGCAACGC GCTGCGCTTC CTCTCCCCCC GGGGGCAGGG CGAGGCCACC GTCACTGACT CGTACGGCCT GTCGGGGCGG CGGCCCGATC GGGCAGCGGG CAGGATAACG GCATGA
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Protein sequence | MGTPVIDVHS HAVPRGWPDL AAACGGSGWP WLRVDSERAA MIMVGEMEFR PVGAECWDPA IRLADMAADG VDVQVVSPTP VFFCYDRPAA QAVKVARIFN DRMVEITANG GGRLVPFCQV PLQDPEVACA ELDRCLAAGH AGVEIGNHVG DLDLDDSGIV EFLTHCAEVG APVFVHPWDM PGGPRLDRWM ARWLTGMPAE THLSVLAMIL GGVFDRVPET LRICFAHGGG SFPFWLGRAD NAWHRRGDLV RGASARPPGS YVDRFFVDSV VFEPAALRLL VDAMGADQVL LGSDYPYPLG ERPVGTVVHR SDFLTPDQRA GLLGGNALRF LSPRGQGEAT VTDSYGLSGR RPDRAAGRIT A
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