Gene Strop_3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3457 
Symbol 
ID5059926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3964833 
End bp3965174 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content66% 
IMG OID640475706 
Producthypothetical protein 
Protein accessionYP_001160266 
Protein GI145595969 
COG category[S] Function unknown 
COG ID[COG3296] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.442595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGCG AGGACCGGAT GTGGCTCCTC GTCGCGCACC TCGGCGGCGC ACTCGGCGCA 
CTGATCAGCT TTGGTCTGCT TGGGTTCGTC GCCCCGCTGG TCGTCTACCT GGCCCGCGGC
AACCAGTCAC CGACCGTCCG CGCGCACGCC CAGGCGGCGC TCAACTTCCA GATCACCTGG
TCCTTGATCG CCTTCATCCT GCTCTTCGTG GGCTGGTGCC TGCTGTTCCT GCCGAGCATC
GCCGTCGTGG TGATCCAGAT CGTGTTCGGC GTCATCGCCG CCCTACGGGC GAATGAGGGC
CGGGAGTACC GCTACCCGAT GTCGGCCACC CTCATCAAGT GA
 
Protein sequence
MNSEDRMWLL VAHLGGALGA LISFGLLGFV APLVVYLARG NQSPTVRAHA QAALNFQITW 
SLIAFILLFV GWCLLFLPSI AVVVIQIVFG VIAALRANEG REYRYPMSAT LIK