Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3346 |
Symbol | |
ID | 5059811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3841186 |
End bp | 3841974 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475594 |
Product | regulatory protein, TetR |
Protein accession | YP_001160158 |
Protein GI | 145595861 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.213794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCAC CTGACGTAAC CAGCGCCGGA GACCCCGCGC GTACGCTCGC CCTGCTCTGG CGGGAGCCAT CGACCGCGGC GCGCCGAGGC CCGCAACGCG GCCTCGATCT GGACGCGGTG ATCGAAGCGG CGACCGCGGT CGCCGATGCC GAAGGGCTGA ACGGTCTGAC CATGCGCCGC GTCGCCCAAG AGCTGCGGGT CTCCCCCATG ACCCTCTACA CGTACGTGCC CGGCAAGGCG GAGCTACTCG ACGTGATGCT CGACGCCGCG TACGGCCGGA TGTCGCGCAC CGACACCACC GGACAACCCT GGCGAGCACG GCTGACCGCC GTGGCCGAGG AGAACCGGGC GCTCTTCGCG ACCCATCCGT GGACCGCCAC GGTCTCCACG CTGCGTCCCC CGCTCGGTCC GGGCGCGATC GCCAAGTACG AGCACGAGCT GACCGCCCTG GACGGCCTGG GTCTCGACGA CGTCGAGATG GACGACTGCC TGACCCTCCT GCTGAGCTTC GTCCAGGCCA ACGCCCGAGT CACCGCCGAT GCCCGGGCCA CTGCCCAGCT CACCACCATG ACCGACGACC AGTGGTGGGC GGCCGCCGGG CCGTTGCTGG CCCGGGTCCT CGACCCCGCG GCCCACCCGC TGGCCACCCG CGTCGGCAGT GCCGCCGGCG CGGCTCACGG CAGCGCCCAC GACCCCGCCC ACGCCTACGA GTTCGGCCTC CGCCGCCTCC TGGACGGGCT CGCCACACTC ATCGAACGCG CGATACCCGC GGCGTCAGGG AACTCCTGA
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Protein sequence | MRAPDVTSAG DPARTLALLW REPSTAARRG PQRGLDLDAV IEAATAVADA EGLNGLTMRR VAQELRVSPM TLYTYVPGKA ELLDVMLDAA YGRMSRTDTT GQPWRARLTA VAEENRALFA THPWTATVST LRPPLGPGAI AKYEHELTAL DGLGLDDVEM DDCLTLLLSF VQANARVTAD ARATAQLTTM TDDQWWAAAG PLLARVLDPA AHPLATRVGS AAGAAHGSAH DPAHAYEFGL RRLLDGLATL IERAIPAASG NS
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