Gene Strop_3188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3188 
Symbol 
ID5059653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3659172 
End bp3660176 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content69% 
IMG OID640475436 
Productalcohol dehydrogenase 
Protein accessionYP_001160000 
Protein GI145595703 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.692541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCG CCGCAAACCG TGAGATTCAT CTGGCCGCAC GTCCGCAGGG CTGGCCGACC 
GAGGACACCT TCCGGTTGGC CACCACCGAC GTCCCCACCC CCGGGCCCGG GCAGATCGTC
GTCCGCAATA CCTTTATGTC TGTCGATCCA TATATGCGGG GACGGATGAA TGACGTTGCG
TCGTACGTCC CGCCCTTCGC GTTGGACGCA CCGCTCGACG GCGGGGCGGT CGGCGAGGTG
GTGGCGAGCG AGGCCGATGG CTTCGCCGTC GGCGACACCG TGCTCCACGG GCTCGGCTGG
CGGGAGTACG CGCTGTTGGA TGCGTCGACC GTCCGGACGG TCGATCCTGC CCTCGCCCCG
GTCAGCACGT ACCTCGGAGT GCTCGGCATG ACCGGGCTCA CCGCGTACGC CGGACTGCTC
GAGGTTGCCG CGATGCAGCC GGGGGACACC GTCTTCGTCT CTGGTGCGGC CGGTGCGGTG
GGCAGCATGG TCGGTCAGAT CGCCAAGCTC CGCGGCGCTG GCCGGGTGGT CGGCAGCGCC
GGCTCACCGG CCAAGGTCGA GCGGCTGCGG GCGCTCGGCT TCGACGCCGC CTTCGACTAC
CACGACGGCC CGGTGCTGGA CTCGCTGCGC TCCGCCGCGC CGGACGGGAT CGACGTCTAC
TTCGACAACG TGGGCGGCGA GCACCTGGAG GCGGCGATCG GCGCGATGCG GCAGAACGGC
CGGGCCGCGA TCTGCGGGAT GATCGCCCAG TACAACGCGG CTGAGCCGCC GGCTGCCCCG
CGCAACCTGG CGATGATCAT CAGCAAGCGG CTCACCCTCC GCGGCTTCAT CGTCTCCGAC
TACGGGCAGC TGGGCGAGCA GTTCGTGCAG GAGGTCGGCG GCTGGTTGCG CGACGGGAAG
CTCAGCTACG ACGAGACGAT CATTGACGGC ATCGAGAACG CTCCGGCGGC CTTCCTGGGC
CTGCTCCGTG GCGAGAACCT CGGCAAGATG CTGGTCCGGG TCTGA
 
Protein sequence
MNSAANREIH LAARPQGWPT EDTFRLATTD VPTPGPGQIV VRNTFMSVDP YMRGRMNDVA 
SYVPPFALDA PLDGGAVGEV VASEADGFAV GDTVLHGLGW REYALLDAST VRTVDPALAP
VSTYLGVLGM TGLTAYAGLL EVAAMQPGDT VFVSGAAGAV GSMVGQIAKL RGAGRVVGSA
GSPAKVERLR ALGFDAAFDY HDGPVLDSLR SAAPDGIDVY FDNVGGEHLE AAIGAMRQNG
RAAICGMIAQ YNAAEPPAAP RNLAMIISKR LTLRGFIVSD YGQLGEQFVQ EVGGWLRDGK
LSYDETIIDG IENAPAAFLG LLRGENLGKM LVRV