Gene Strop_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3164 
Symbol 
ID5059629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3630828 
End bp3631079 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content69% 
IMG OID640475412 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001159976 
Protein GI145595679 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0375363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA CCGTGCACAA CCGGATCGCG GTGCTGCGCG CCGAACGGGG CATCTCCCGG 
CGACAGCTCG CCGACGCGCT CGGTGTGCAC TACCAGACCA TCGGCTACCT GGAGCGGGGG
GAGTTTCGGC CCAGCCTGCA CCTGGCGCTG CGAATCGCCG CGTACTTCGA GGTGCCGGTC
GAGGTGGTCT TCTCGATCGA ACCGTTCCCC CGCATCGGCG ACGCCACCGC CGGGAGCCGC
CGTTCAGCGT GA
 
Protein sequence
MSETVHNRIA VLRAERGISR RQLADALGVH YQTIGYLERG EFRPSLHLAL RIAAYFEVPV 
EVVFSIEPFP RIGDATAGSR RSA