Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2984 |
Symbol | |
ID | 5059448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3413455 |
End bp | 3414414 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640475235 |
Product | sugar isomerase (SIS) |
Protein accession | YP_001159800 |
Protein GI | 145595503 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.389067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGATC ACGAGGTGGA CACCACCGCG GAGACCGCGG TGGCCGACGC CGACGGGTTC GACCGCGGCG TCCGCGCAGA GGCGGCCGAC GGCGTCCTGG CTCGGGTCCG GGCCGGGGCG GGCGACCTGA CCGGGGCCCT GCGCCGGGTC GCTGAGCACG TGCTCAGCGA CCCGGAGGCC GCCACCCGCG CCACCATCGT CGAGCTGGCC GAGGGCAGTG GCACCTCCCC GGCCACCATC ACCCGCTTCT GCCGGGCGAT GGGCTTCGAG GGGTATGCGG ACCTGCGGCT CGGCATCGCC GCCGAGAGCG GTCGGGCCCG TCTGGCCGGG TGGACCGTCG ATATCGGCCG CGAGATTCAG CCCGGCGATC CGCTGCGCCG GGTGCTCGAC CAGATCATCG CCGCCGACAC CCGCGCAATG CACGACACCG CCGCCCTGCT CGACCTCGCC GCGGTGGAGC GAGCCGCCGC GGCGATCGCC GGCGCAGGCC GGGTGAACAT CTTCGGCGTC AGCGGCAGCG CCCTGGTCGG CGAGGAGATG CAAATCATGC TCCACCGCAT CGGAGTCGCC GCCTGGGCCT GGAACGACGT GCACGAAGGG CTCGCCTCGG CGGCCCTGTT GCGCAGCGGC GACGTCGCCC TCGGTGTCTC GCACAGCGGC CGGACTCGGG AGACCATCGA GATGCTGGCG GAGGCCGGTA GTCGGGGGGC GACCACCGTC GCAGTCACCG GCTTCTCCCG CTCGCCGCTC GCCGAGCTGG CGGACATCGC GCTGTTCACC GCCAGCGGGG CCACCACCTT TCGCCCGGAC GCGCTGTCCG CCCGGCATCC CCAGCTGGTC GTGCTCGACC TGCTCTACAT CGCCGTCGCA CAGCGCATCC ATGACCGGGC CCACGCAGCC CTGCGGCGTA CCGCCCAGGC CGTTGAGGGG CACAAGGCGG CGAAGGAGGC CAACCCATGA
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Protein sequence | MVDHEVDTTA ETAVADADGF DRGVRAEAAD GVLARVRAGA GDLTGALRRV AEHVLSDPEA ATRATIVELA EGSGTSPATI TRFCRAMGFE GYADLRLGIA AESGRARLAG WTVDIGREIQ PGDPLRRVLD QIIAADTRAM HDTAALLDLA AVERAAAAIA GAGRVNIFGV SGSALVGEEM QIMLHRIGVA AWAWNDVHEG LASAALLRSG DVALGVSHSG RTRETIEMLA EAGSRGATTV AVTGFSRSPL AELADIALFT ASGATTFRPD ALSARHPQLV VLDLLYIAVA QRIHDRAHAA LRRTAQAVEG HKAAKEANP
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