| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2892 |
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| Symbol | |
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| ID | 5059355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3308853 |
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| End bp | 3310760 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640475144 |
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| Product | regulatory protein, TetR |
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| Protein accession | YP_001159710 |
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| Protein GI | 145595413 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.794047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.565465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGGGGCA CCTGCTCGAC ATGCTCGTCC TGCCGTGACC GCCGCCCGCT GGCTCGCCCT
GGGGGTGCCC CTGCTGGCGG TGCTGGCCGC GGCCCGGCTG GAGCGCGACC GGCGGGCGCG
GGCCGCCGCC CTGCTCGCCG CCGTGGCCGC CGCCCTGGGC GTCGCCGCGC TGAACGAGTC
GGCCCGCCGG ACGGGCTGGT ACGCGTTCGC GCCGGTGCAC GGGGCCTACC GGGGGATACC
GGTCGACCTG TGGCTGGGTT GGGCGGCGCT CTGGGGCGCG CTGCCGGTGC TGCTACGCCG
GTTCCTGCCC CTGCCCCTTG CGCTGGGCCT GCTGCTCTGG CTCGACGTGG TGGCGATGCC
GGCGCTGCAC CCGCTCGTCC TGCTCGGGCC GCACTGGCTG GTGGGCGAGG TGGTGGGGCT
GCTCGCCGTG GCTCTCCCCG CGCAGCTGCT CGGCCGGTGG AGCGCCGACG GCCGGCACCT
GCGGGCCCGG GTGCTGCTCC AGGTCGTCGT CTTCGCCACG CTGCTGCTGT GGCTCGTGCC
CGGTGTCGCC TTCGAGCTGG GTGGCGGCTC GTGGTCCCCG CTGACCGGGC TGTCCCGGGC
CGCCCTCCTG GTCCTGGCCC AGGTCGCGCT GCTGGTGGCC ACCCCGGCGC TCATCGCGGT
ACGCGAGTTC GCCGGACGGG GCGGCGGTAC ACCGTACCCG TGGGATCCGC CGGCCCGGCT
CGTCAGCACC GGGCCCTACG CGTACCTGGC GAACCCGATG CAGGTCGGCG CGGCTGCCCT
GCTCCTACTG ACCGCGGCGG TCACCCGCAG CATCGCGCTG CTGGCCGCGA CCGCCCTCGC
CGTGGCCTTC AGCGCGGCCG TGGCCCGGTC GCACGAGGAG CACGACCTGG CCCGCCGGCA
CGAGGACGCC TGGCGGGACT GGCGACGGGC GGTACGCGAC TGGTGTCCGC GCTGGCGGCC
GTACGCCTCG GGCGCGCCCG CGGTGTTGCG GCTCGATGCC GGGTGCGGGC CGTGCGCGGC
GGTCTGGCGG TTCCTGGCGC GGCGGGACCC AGTGAGCCTG ACGATCGCGC CCGCCAAGGA
GGGGCAGCTG CGGGCCGGGT ACATGGGCGA CGACGGCCAC TCGGAACGGG GGGTGGCCGC
CGTCGCCCGT GCTCTCGAAC ACCTCAACCT CGGCTGGGCC TGGGTGGGCT GGACCCTGCG
GCTGCCCGGC ATGACCTGGC TGGCGCAACT GGTGACGGAT GCGATGATCG CACCGCCACA
CCCGGCGGGA GGAGAGCGAT GTCCGACACC AAGCGACGCC TGCTCGACGG CACCCTCGCC
GCGATCCGCC AGCATGGCAT CGCCGGCGTC TCGGCCCGCA CCATCGCCAC TGCCGCCGGA
GTGAACCAGG CGTTGGTCTT CTACCACTTC GGGACGCTCG ACGAGCTGCT GGCAGCCGCG
TGCCGGACCG GCACGGCCGA GCGGGTCGCC CACTGGTCGG CCCGGCTGCG CCAGGTCGGG
TCGCTGCGCG AACTGCTCGA CGTCGGGCGC GGCCTGCACG CGAAGGAACG CGAGCTGGGC
AACGTGTCCG TGCTGGCCCA GATGCTCGCC GGCGCACAGG CCGACGAGCG CCTCGCCGCC
CCCACCGCCG AGTCCCTGCA GTTGTGGGTG GACGAGATCG AGCTGGTCCT GCGCCGGCTG
CTGGCCGGGT CACCGTTCGC CGAGATCGCC GACGTTCCCG GGCTCGCCCG CGCGGTGTCG
GCCGCCTTCA TCGGCCTGGA GCTGTACGAC GGCGTTGACC GGCCCTCAGC CGAGCGCGCC
ATCGAAGCGC TGGACCAACT CGCCGTGCTC ATCGAGATCG TCGACGACCT CGGCCCGATC
GCCCGGCGCG CCCTCCACAA CAAGATCAGC AAAGCGACCC GACGCTAG
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| Protein sequence | MWGTCSTCSS CRDRRPLARP GGAPAGGAGR GPAGARPAGA GRRPARRRGR RPGRRRAERV
GPPDGLVRVR AGARGLPGDT GRPVAGLGGA LGRAAGAATP VPAPAPCAGP AALARRGGDA
GAAPARPARA ALAGGRGGGA ARRGSPRAAA RPVERRRPAP AGPGAAPGRR LRHAAAVARA
RCRLRAGWRL VVPADRAVPG RPPGPGPGRA AGGHPGAHRG TRVRRTGRRY TVPVGSAGPA
RQHRALRVPG EPDAGRRGCP APTDRGGHPQ HRAAGRDRPR RGLQRGRGPV ARGARPGPPA
RGRLAGLATG GTRLVSALAA VRLGRARGVA ARCRVRAVRG GLAVPGAAGP SEPDDRARQG
GAAAGRVHGR RRPLGTGGGR RRPCSRTPQP RLGLGGLDPA AARHDLAGAT GDGCDDRTAT
PGGRRAMSDT KRRLLDGTLA AIRQHGIAGV SARTIATAAG VNQALVFYHF GTLDELLAAA
CRTGTAERVA HWSARLRQVG SLRELLDVGR GLHAKERELG NVSVLAQMLA GAQADERLAA
PTAESLQLWV DEIELVLRRL LAGSPFAEIA DVPGLARAVS AAFIGLELYD GVDRPSAERA
IEALDQLAVL IEIVDDLGPI ARRALHNKIS KATRR
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