Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2881 |
Symbol | |
ID | 5059344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3294127 |
End bp | 3296406 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640475133 |
Product | hypothetical protein |
Protein accession | YP_001159699 |
Protein GI | 145595402 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.130306 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAGCCA CCTTCATCGG CGTGCGCCAC CACAGCCCGG CCTGTGCCCG GCTCGTTGCC GAGACAATCT CGGAACTACG ACCGGCGTAC GTGCTGGTCG AAGGACCAGT CGACATGAAC GGCCGGCTCG ACGAACTGCT ACTCGACCAC GAGCTGCCCG TCGCGGTCTT CACAAGCTAT CGCGACTCGG AAAGGCAGCA TGCCTCCTGG GCGCCGTTCT GCGCGTACTC CCCGGAGTGG ATCGCGCTGA CCACGGGCCG CGAGGTGGGT GCCCAGCTGC GCTTCATCGA CCTGCCCGCC TGGCATCCCG CGTTCGCCCG ACGGCGCAAC CGCTACGCGG ACGCTGAGCA GCGGTACGTC GACGTGATGG AGTCGCTGTG CCGCACGTTC GCGGCCGACA ACGTCGACAC GCTGTGGGAC CACCTGTTCG AGGTCCCCCC GGCCGACGGC CTCGCCGAAC GGCTCGCCGT CTACTTCGAC CTGGTCCGCG GCGAGTCGAC GGTCGGTCCG GAGGACACCG AGCGGGAGGC CTACATGGCC CAGTGGGTGC GGGCGGCCGT CGCCGACGCC GGGGACCGGC CGGTCGTGGT CGTCACCGGC GGGTTTCACC GGCCGGCACT TATCCAGCTC AGCGCCACCA CCAACAGCGC CCCCTCCCCG GTCGGCCTCG CCTGGCCGCA GACTCCGGGA CTCCCGGCCA CAGCGGCCGG CGGCAGCTAC CTGGTGCCGT ACTCGTTCCG TCGGCTCGAC GCCTTCGACG GCTACCAGTC CGGGATGCCG TCGCCGGACT ACTACCAGCG GCTCTGGGAC ACCGGGCCCG AGTCCGCCGC GGACCAGTTG GTGGCCGCGG TGGTCGGGCG GCTGCGGGAA CGGCGGCAGG CGGTGTCGAC GGCGGACCTG ATCGCGGCGC GAGTCTCGGC GGAAGGGCTT GCCCGGGTAC GCGGCCACCG GTACCTCGCC CGGGTCGATG TCCTCGACGG ACTGGCCGCC GCACTGGTCA ACGAGGCGCT CGACGTGCCC CTGCCCTGGT CGACCCGGGG CACCCTGCGC ACGGGCACCC ATCCCGCGAT AGTCGAGATG GTCGCCGCCC TCAGCGGCGA CCGCGTCGGC CGGCTGCATC CGTCGACCCC ACTTCCGCCG CTGGTACACA ACGCCGAGGC CGATCTGGAG GGGCACGGGC TCGACCGGCC CGGGGACGTA CGCCTGACGT TGACCGACCC GACCGACCTG GATCGCAGCC GGATCCTGCA CCGGCTGCGA ATCCTGCGGA TCCCCGGCTT CACCCGGCAC ACCGGCCCCA CCACCGGCAT CGACCCGATC CTCGACGAGG AGTGGAGCGT ACGCGCCGAC GACAACCGCT TGCCGGCCCT CATCGAGGGC GGCGGCTACG GCCGGACGCT CGATGAGGCA GCGGCCGCAG TGCTGGCGGA TCGGATCGCC GCCGCCCGAG GCGACATGGA CCAGTTGGCC GCCGCCCTGT TCGACGCGGC CCTGTGCGGC AGCGGCCAGG TCTCCGACCG GGTGCTGCAC GACGTCACCG GGGCCGTCGC CGCCGCACCC GAGATGGGAC CCGTCGGCCG GGTACTGGCC GTCGTCCTCG CGTTGTGGCG CCACGACCAC CTGCTGGGCA CCGTTCGCAC CGGAACGCTG GGCGCGGTCG TCAAAGCCGG TGTAGAGCGC GTCCTGTGGC TCGCCGAGGG GGTTTACGGC GGGGCGGCGC CAGCCGAGCC GGCGCGGATC GACGCGCTGG CGGCAGTCCG CGACGCCCTC GTGCACGCCC GGTCCGCGCT CGGGCTCGAC CGCGAAGCGG CCCTGGCCGT GGCAGCTCGG ATCGCCAGCA ACGCGGACGT GCCGCCGGAC CTCCGCGGGG CGGCGTTCGG CTTCGCCTGG TCGCTGGGTG CCCAGGTCGA GCCCGTTCGC GCCGTGCGTG GCGCGTTCGC CCCGGCGTCG GTCGGTGACT GGCTCGCCGG GATGTGCGCA TTGGCCCGGG AGGAGGTCCT CGCGGCCGAC GGCGTCCTCG ACCTGCTCGA CGAGTTGCTC AGCGGGATGG GTGAGCAGGA GTTCCTCATC GCCCTGCCGG CGCTGCGTCA AGCGTTCGCG TACTTCCCGC CCCGGGAACG CGAGACGATC GCCCGGCACG TGCTGGCCCG GCGCGGCGTC GCCGGGTCAG GCCGGACGCT GCTGCGGTTG CCCGTCGCAC CCGACGTGGT CGCGGCCGGC CGCGACCTCG ACGAGCGGGT CAACGCGCTT CTCACCAGGG AAGGACTGAT GGGCACGTGA
|
Protein sequence | MGATFIGVRH HSPACARLVA ETISELRPAY VLVEGPVDMN GRLDELLLDH ELPVAVFTSY RDSERQHASW APFCAYSPEW IALTTGREVG AQLRFIDLPA WHPAFARRRN RYADAEQRYV DVMESLCRTF AADNVDTLWD HLFEVPPADG LAERLAVYFD LVRGESTVGP EDTEREAYMA QWVRAAVADA GDRPVVVVTG GFHRPALIQL SATTNSAPSP VGLAWPQTPG LPATAAGGSY LVPYSFRRLD AFDGYQSGMP SPDYYQRLWD TGPESAADQL VAAVVGRLRE RRQAVSTADL IAARVSAEGL ARVRGHRYLA RVDVLDGLAA ALVNEALDVP LPWSTRGTLR TGTHPAIVEM VAALSGDRVG RLHPSTPLPP LVHNAEADLE GHGLDRPGDV RLTLTDPTDL DRSRILHRLR ILRIPGFTRH TGPTTGIDPI LDEEWSVRAD DNRLPALIEG GGYGRTLDEA AAAVLADRIA AARGDMDQLA AALFDAALCG SGQVSDRVLH DVTGAVAAAP EMGPVGRVLA VVLALWRHDH LLGTVRTGTL GAVVKAGVER VLWLAEGVYG GAAPAEPARI DALAAVRDAL VHARSALGLD REAALAVAAR IASNADVPPD LRGAAFGFAW SLGAQVEPVR AVRGAFAPAS VGDWLAGMCA LAREEVLAAD GVLDLLDELL SGMGEQEFLI ALPALRQAFA YFPPRERETI ARHVLARRGV AGSGRTLLRL PVAPDVVAAG RDLDERVNAL LTREGLMGT
|
| |