Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2656 |
Symbol | |
ID | 5059119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2991192 |
End bp | 2991932 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640474912 |
Product | methyltransferase type 12 |
Protein accession | YP_001159478 |
Protein GI | 145595181 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.607751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.322619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGATC CGTACGCACA GTCAGCCGAG TACATAGACC TCCTCATCGC CGACGCCTGG GGGCTCTTCG CTCCCGGACT CTCCGAGGCT CTGCACGGCC TCGGCGACGA ACCCGGCGTC ACGGTGGACC TGGGCGCCGG TACGGGGCGT GGCGTCGCGG TGATCTGCGC CAGCCTGCCT GACAGCTCGC CGGTGCTGGC CGTGGAGCCC TCGCCCGCAC TCCGCGCGGT GCTCCTCGCC CGAGCGCACG AGGACGCATC CCTGAGGTCG CGCGTTACGG TGTCGCCGGC CGACGCGATG AGCGTGCCAA TGCCCGAGCA GGTGCGGGTG CTGGTGGCGA TGAACATGAT CGGGCACTTG TCGCCGGACG ACCGGCGGGA ACTCTGGCAG CGCGTCGCCC CGCGCCTGGT CCGTGGGGGT CGCGTGGTCG TCAACCTCGC GCCGCCGGCG CGTCCGGTCG CGATCCCGAG AACCCGAATG GCCAGCCGCA CCGTGGGTGG CCTGACCTAC GAGGGCTGGG CGAGCGCCGA GGCTGTCGGC GAACACCAGA TCAGGTGGCA CATGACCTAC CTGACCCGAT CGCCGGAGGG GGCGGCGGTG GCGGAGGTGG CCGTGAACTA CGACTGGTGG GTCATGGACG AGGGGGAGTT GCGCGCGGAG TTCGCGGAAC ATGGGTTGAC CATGCGGCAG ATCGGACACC CCGACGCCGG CCTCTACGTC GCGAGTCACG TGCAGGGCTG A
|
Protein sequence | MDDPYAQSAE YIDLLIADAW GLFAPGLSEA LHGLGDEPGV TVDLGAGTGR GVAVICASLP DSSPVLAVEP SPALRAVLLA RAHEDASLRS RVTVSPADAM SVPMPEQVRV LVAMNMIGHL SPDDRRELWQ RVAPRLVRGG RVVVNLAPPA RPVAIPRTRM ASRTVGGLTY EGWASAEAVG EHQIRWHMTY LTRSPEGAAV AEVAVNYDWW VMDEGELRAE FAEHGLTMRQ IGHPDAGLYV ASHVQG
|
| |