Gene Strop_2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2642 
Symbol 
ID5059105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2965055 
End bp2966044 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content70% 
IMG OID640474898 
Producthypothetical protein 
Protein accessionYP_001159464 
Protein GI145595167 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.13056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.212134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTAGAAC ATGTTTCACT GATTCTCGTG GATACCGCTT CGGCGCCCCC GCTCGCCGCC 
CCGCTGGACA TCGGCTTCGA CTACACCCGC TCCCTCGGCC CGGTCCTGGG GCGATTCATG
ACCGGTCTGC GCGACCGTCG AGTGCTTGGC GCCCGCACCG CCGACGGCCG CGTCCACGTT
CCCCCACTCG AATACGATCC GGCGACCCAC GCCCCGGTGA CCGAGCTCGT TCCCGTCCCG
CACACCGGCA CCGTGACCAG CTGGACCTGG ACCGACCGAC CGCTCGACGG GCAGCCCCTC
GACCGACCGT TCGGCTGGGC ACTGGTCCGG CTCGACGGAG CCGACACGGC GCTCCTGCAC
GCCGTCGATG CCGGCACCCG GGAGTCGATG AGGACCGGCA TGCGGGTCCG CATCCGCTGG
GCCGCACAGC GATCCGGGCA CATCCGCGAC ATCGCCTGCT TCGAGCCCGA CCAGGGCCCA
CCCCCCACGC TCGACGACAC CATCAGTGGC GATCCCGTCA CCGGCATAAC GACTCCCATT
CGGCTCTCCT ACACGCACAC CACCTCCGCC GAGGAGAGTC GCTACCTGCG CGCGCTGGCC
GAGGGGCGGC TGCTCGGCCA GCGCTGCCCG GCCTGCCGCA AGGTGTACGT ACCGCCTCGG
GTCTGCCCGG CCGACGGCGT GCCGACCGAG GAGGAGGTAC CAGTCCGCGA TCGCGGCACG
ATCACCACGT TCTGTGTGGT CAACGTTCCC TTCGCCGGAC AGCGGCTGGA CCCCCCGTAC
GTGGTCGCCC AGGTCCTCCT CGACGGTGCC GACATCCCGA TCCCCCACCT GATCCTCGGT
CCGGCCACCA GCGAGGTACG GATGGGAATG CGGGTGGCCG CGGTCTGGCG GGAACCGACG
ACCTGGTCAA CCACCCCGGA GAACATCGCG CACTTCCGCC CCACGGACGA ACCGGATGCG
CCGTACGAGT CCTACCAGGA GCACCTGTGA
 
Protein sequence
MLEHVSLILV DTASAPPLAA PLDIGFDYTR SLGPVLGRFM TGLRDRRVLG ARTADGRVHV 
PPLEYDPATH APVTELVPVP HTGTVTSWTW TDRPLDGQPL DRPFGWALVR LDGADTALLH
AVDAGTRESM RTGMRVRIRW AAQRSGHIRD IACFEPDQGP PPTLDDTISG DPVTGITTPI
RLSYTHTTSA EESRYLRALA EGRLLGQRCP ACRKVYVPPR VCPADGVPTE EEVPVRDRGT
ITTFCVVNVP FAGQRLDPPY VVAQVLLDGA DIPIPHLILG PATSEVRMGM RVAAVWREPT
TWSTTPENIA HFRPTDEPDA PYESYQEHL