Gene Strop_2557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2557 
Symbol 
ID5059020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2878442 
End bp2878996 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content70% 
IMG OID640474813 
Producthypothetical protein 
Protein accessionYP_001159379 
Protein GI145595082 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.463676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.298043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGACC AGGTGGTTTT CGGGCGGGTA ATTGCGGACT TCGGTGAGGT ACGGCTACGG 
CCGGTGGATC CGGAGGGCGA CCTGGACGTC ATCCACGGCT GGGTCAGCCA GGAGCGGGCT
CGGTTCTGGG GCATGCGCGA CGCCGGTCGG AATCGGGTGG CGGAGATCTA CCGCTACCTG
GACTCACTCC CCACTCACCA TGCCTGGCTG GCGCTACGCG ACGGGGCTCC GGCGGCCTTG
TTCCAGACGT ACCAAGCGGA CGCCGATCCA GTCGGCGAGG TGTACCCGGT CCTGCCCGGC
GACCACGGCA TTCACTTTCT GATCGGCCCG CCGGCCCGCC CCGAGCCGGG CTTCACCGGC
CACCTTTTCG AGCTCCTGGT CGACTTCGTC TTCGCCGACC CCACCCACCA CCGGATCGTC
GCCGAGCCCG ACGCCCGCAA CGAGCGGGCA CAGGCTCGAC TGCGCCGTAC CGGCTTCGTC
GACGGGCCGC TGGTCGACCT GCCGGACAAG CGGGCTCGAC TGATGTTCCT GGACCGCGTC
GCCGCGGGCC GCTGA
 
Protein sequence
MGDQVVFGRV IADFGEVRLR PVDPEGDLDV IHGWVSQERA RFWGMRDAGR NRVAEIYRYL 
DSLPTHHAWL ALRDGAPAAL FQTYQADADP VGEVYPVLPG DHGIHFLIGP PARPEPGFTG
HLFELLVDFV FADPTHHRIV AEPDARNERA QARLRRTGFV DGPLVDLPDK RARLMFLDRV
AAGR