| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2478 |
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| Symbol | |
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| ID | 5058941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2786489 |
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| End bp | 2787595 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640474736 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_001159302 |
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| Protein GI | 145595005 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.124891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGC AGATGTCGCC GATGCGCGAG TCGCCGGTCG CACTGGCCGA CTTCGCCGAC
CTCGCCCGCG CGGTACTACC GCCGGAGGTG TGGGACTTCG TGGCCGGCGG TAGCGGCGCC
GAGACGACGC TGGCCGCGAA TCGACGGGCT TTGGACCAGA CCGGCGTGCT GCCCCGCGTG
CTGTGCGGTG TGCCGACGCC ACCGACCGAC GCCCGGCTGC TGGGAGCCGT CCACACGTTG
CCGGTGGCGG TCGCACCGAT GGCGTATCAA CGGCTGTTGC ACCCCGACGG GGAGGTAGCC
CTTGCGGCGG CGGCCGGCGC GGCCGGCATC CCGTATGTGG CCAGCACGCT CGGCAGCGTC
CCGATCGAAC AGGTCGCGCG GGCCGGCGGT GACGTCTGGT TCCAGCTCTA CTGGCTGCGT
GACCGGGGAC TCGTCGCCGA CCTGCTGGAC CGGGCCGAAG CGGCGGGCTG CACCGCGCTG
ATGCTCACCG TGGACGTGCC AATCCTCGGT CGTCGGCTGC GGGACGTGCG CAACTCGTTC
GCCATTCCCG CGGATGTGGT CGCCGCGAAC CTGCCCACCG GCCGGGGCAG CCTCGCCCAC
GCGGCGACCC CGGGCGTGTC CGCGGTGGCC GCACACACCG GTGCGGTCTT CGCGCCGGCC
GTGAGTTGGG ACGACCTGGA GTGGCTGCGG GAGCGGACCT CGGTTCCGCT GGTGGTCAAG
GGGGTACTCG ATCCGCGTGA TGCCACCCGC GCGGTGGCGG TCGGAGCGGA CGCGGTGGTG
GTCTCCAACC ACGGCGGACG CCAGCTTGAC GGTGCACCGG CCACCGCGAC CGCGTTGCCC
GCGGTCGTCG ACGCGGTGGG CGACCGGTGT GAGGTGCTGT TGGACAGCGG TGTTCGGGGC
GGGATGGACG TGTTGCGGGC CCTCGCCCTT GGTGCGCACG GCGTCCTGGT GGGCCGCCCG
CTGCTCTGGG CGTTGGCGGC CGGCGGCCGC TCCGGTGCCG AGGCGGCCCT GTCGCTGCTG
GCTGACGAGT TCCGTGACGC GCTGACGTTG GCGGGGTGCG CCGACGTGGT GGCGGCACGG
CACCTGCGGA CGACGAGGGT GGAGTGA
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| Protein sequence | MAEQMSPMRE SPVALADFAD LARAVLPPEV WDFVAGGSGA ETTLAANRRA LDQTGVLPRV
LCGVPTPPTD ARLLGAVHTL PVAVAPMAYQ RLLHPDGEVA LAAAAGAAGI PYVASTLGSV
PIEQVARAGG DVWFQLYWLR DRGLVADLLD RAEAAGCTAL MLTVDVPILG RRLRDVRNSF
AIPADVVAAN LPTGRGSLAH AATPGVSAVA AHTGAVFAPA VSWDDLEWLR ERTSVPLVVK
GVLDPRDATR AVAVGADAVV VSNHGGRQLD GAPATATALP AVVDAVGDRC EVLLDSGVRG
GMDVLRALAL GAHGVLVGRP LLWALAAGGR SGAEAALSLL ADEFRDALTL AGCADVVAAR
HLRTTRVE
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