| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2456 |
|---|
| Symbol | |
|---|
| ID | 5058919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2761887 |
|---|
| End bp | 2762687 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640474714 |
|---|
| Product | chitin-binding domain-containing protein |
|---|
| Protein accession | YP_001159280 |
|---|
| Protein GI | 145594983 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.361389 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTC GCAAGCTCAT CGCCTACCCT TTGACAGCTG TCGCGGCCGC GGCCGGCTCG
ACACTGGTAT TCGCGTCGCC CGCCTCGGCA CACGGGTACG TGGCCTCGCC GCCGAGCCGG
CAGGCGCTGT GCGCGCAACG CGCCGTTCCG GACTGCGGCC CAATCACGTA CGAGCCGCAG
AGTGTGGAGG GGCCGAAGGG CCTCAAACGC TGTGACGGCG GGCTTTCCCA GTTCGCCGTG
CTGAACGACA ACAACCGTGG CTGGCCGGCT CGGGAGGTGG GCGACACCGT CACCTTCAGC
TGGACGCTGA CGGCTCGGCA TCGCACCAGC ACGTGGGAGT ACTTCATCGG CGACACCCGG
ATCGCCCAGT TCGACGGTGG TAACCGACAG CCCGAGGCGG TCGTCACCCA CCGGGTCGAT
CTGAGTGACT TCGCGGGCCC GCAGACGGTA CTGGCGATCT GGAACATCGG CGACACACCG
ATGGCCTTCT ACAACTGCAT CGACCTCGAC GTGCAGGGTG GAGGTACCAC CCCGCCGACC
CAGTCGCCGA CTCCCAAACC CACCAGCACG CCGACGCAGG AACCGACCGG CCAACCCACA
TCGACTGCCC TGCCCACCAA CCCAGGGACG CCAGGTCAGA CCGGTGGGCC GACCGCCCCA
GCCTGGGCAG CGGGTACCGC CTACCGGGTC GGCGACGAGG TCGCCTTCGA CGGAGAGCGC
TACCGTTGCC GGCAGGCTCA CACCGCGATT CGTAGCTGGG AGCCGTCGCT GTTCACTCTC
GCCCTGTGGC TGCCGGTGTG A
|
|---|
| Protein sequence | MNTRKLIAYP LTAVAAAAGS TLVFASPASA HGYVASPPSR QALCAQRAVP DCGPITYEPQ
SVEGPKGLKR CDGGLSQFAV LNDNNRGWPA REVGDTVTFS WTLTARHRTS TWEYFIGDTR
IAQFDGGNRQ PEAVVTHRVD LSDFAGPQTV LAIWNIGDTP MAFYNCIDLD VQGGGTTPPT
QSPTPKPTST PTQEPTGQPT STALPTNPGT PGQTGGPTAP AWAAGTAYRV GDEVAFDGER
YRCRQAHTAI RSWEPSLFTL ALWLPV
|
|---|
| |