| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2390 |
|---|
| Symbol | |
|---|
| ID | 5058853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2682825 |
|---|
| End bp | 2683685 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640474649 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159215 |
|---|
| Protein GI | 145594918 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGGCC CGTCGGACCG GGTCCCTTGT TGTCCTGCAC GTTCGAACCC CGGGCGCTCC
GCCGGGCCTC CTGCTGCTGC GGGTTCGTCA CCACTGTCTC CTTCCCGGTG GGCGGCGGCA
CACGCGGCGA CCGCCGCCAC CCCCGAATAC CCACCGACGT CACCGGACAT GCAGCGGGCT
AACCCGCCCC ACGACGGGTA CGCCCCGCTG GTGGGAGACA ATCACGAGAC AGCGCGGGTG
CTGCTGGAGC GACGGGGACA GACCTACACC GAAGAGGCCG GGATCCGCCT GGCCGACCGG
CCTGGCCCGC TCTACCAGCT GTTGGTGCTC GCCACCCTGC TGAGCTCACG AATTCGAGCC
GGCGTCGCGG TGGCCGCCGC CCGGGAGCTC TTCGCCGCCG GCTACCGCAC GCCGTCGGCG
ATGGAGGCGG CGACCTGGCA GGACCGGGTC GACGCGCTCG GTCGCGGGCA CTACCGGCGC
TACGACGAAC GGACCGCCAC GCTGCTCGGC ACCGGCGCGC GACTCTGCCT GGACCGTTGG
CAGGGTGACC TACGCCGGCT CCACCACGCC GCACAGGGCC GGCCGACGCA GCTACGCCGC
CTGCTCACCG CCTTTCCGGG CATCGGGCCC ACCGGCGCGG ACATCTTCCT CCGCGAGGCT
CAGGCGGTCT GGCCGGACCT GCGCCCCTTC GCCGACCGGC GCACCCTCAG CGGCGCCGAG
CGGTTGGGCC TGCCACAGAC CCCGCGGCGG CTCGCCAGCC TGGTGGCGGA GGCGGAATTC
GGCCGCTTCG CCTCCGCCCT GGTACGGGTC GCGCTCGGCG AGGAGTCCGC TGGTGCGGTG
ACGCGGGAGG CACGCCGGTA A
|
|---|
| Protein sequence | MDGPSDRVPC CPARSNPGRS AGPPAAAGSS PLSPSRWAAA HAATAATPEY PPTSPDMQRA
NPPHDGYAPL VGDNHETARV LLERRGQTYT EEAGIRLADR PGPLYQLLVL ATLLSSRIRA
GVAVAAAREL FAAGYRTPSA MEAATWQDRV DALGRGHYRR YDERTATLLG TGARLCLDRW
QGDLRRLHHA AQGRPTQLRR LLTAFPGIGP TGADIFLREA QAVWPDLRPF ADRRTLSGAE
RLGLPQTPRR LASLVAEAEF GRFASALVRV ALGEESAGAV TREARR
|
|---|
| |