| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2374 |
|---|
| Symbol | |
|---|
| ID | 5058837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2667702 |
|---|
| End bp | 2668607 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640474633 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001159199 |
|---|
| Protein GI | 145594902 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.171601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCTTC CAGAACTCGG CGCCTTCCTC AGGACACGCC GCGACCGTGT CCGACCCGCC
GAGGTCGGTC TCCCCCAAGG CCCGCGCCGG CGCGTCCCCG GGCTGCGCCG CGAGGAAGTC
GCCCAGCTGG CAGGGCTGTC AGCCGACTAC TACACCGAGC TGGAGCGCGG CAGCGCACAG
AACGGCGTGC AGCCCTCGGC CCAGACCCTG GCCGCCCTCG CCCGAGCCCT GCGCCTGAAC
GGCGACGAGC GCGACCACCT GTTTCATCTG GCCGAGCGGC CGGTCCCGCC GTCGGCACAC
GGACCGTCGG CACACGTGCA GCCCGCGCTT CTCGGACTCC TGGACCGGCT GTCCAACACC
CCCGCGCGCG TCATCACCGA CCTGCACGAA ACCCTGGTGG AAAACGACCT GGCCCGAAAC
CTGCTCGGCA CGTCCCCGGC GCACCACGGC CCGGCGGCGA GCTTCGTGTA CCGCTGGTTC
ACCGACCCTC ATGCGCGCGA GAGGTACCCG GTCGAGGATC ACCCACACCA CTCCCGGGTG
TTCGTGGCCG ACCTTCAGGC AGCGGCCGCG CGGCGGGGCC GGGACGCGGA GGTCACGAAG
GTGGTCGCCG TGCTACGCCA CCGTAGCCAG GAGTTCGCAG CTCTCTGGGA CACCCACGAC
GTCGCGGTGC GCCGCATGGA CCACAAGAAG ATCGTCCACC CCACGCTCGG CATCATCGAA
CTCGACTGTT ACAACCTGCT CAGCGAGGAC GGACGCCAAC GCCTGCTGTG GTTCACCGCG
CCGCCCGGAA GCCGGGGAGC CGAGCAGCTG AAACTGCTGT CCGTCATAGG AACCCAGGAC
CTGAGCGTCA CCGACGGCAC GGCACCGGAG GGCTTGTCCG CGGCCGAATC CGGATCGCAG
CGCTGA
|
|---|
| Protein sequence | MNLPELGAFL RTRRDRVRPA EVGLPQGPRR RVPGLRREEV AQLAGLSADY YTELERGSAQ
NGVQPSAQTL AALARALRLN GDERDHLFHL AERPVPPSAH GPSAHVQPAL LGLLDRLSNT
PARVITDLHE TLVENDLARN LLGTSPAHHG PAASFVYRWF TDPHARERYP VEDHPHHSRV
FVADLQAAAA RRGRDAEVTK VVAVLRHRSQ EFAALWDTHD VAVRRMDHKK IVHPTLGIIE
LDCYNLLSED GRQRLLWFTA PPGSRGAEQL KLLSVIGTQD LSVTDGTAPE GLSAAESGSQ
R
|
|---|
| |