Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2360 |
Symbol | |
ID | 5058823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2656475 |
End bp | 2657047 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474620 |
Product | regulatory protein, TetR |
Protein accession | YP_001159186 |
Protein GI | 145594889 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.173305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACCGA GCAAGCGGAT CCTCATCCTC GATGCCGCCC TACGCGTCAT CGAACGTGAC GGCGTCACGG CCGTCACGTA CGAGACCGTC GCCGAGGAAG CCGGCATCAC CAAAGCAGGA CTCGTCTACC ACTTCTCCAC CCGCGAGGCG CTCCTACACG CCGTGCAGGA GCGCCTCGCC ACCCAATGGG AAGCCGCGAT GACCAACGCG GCCGGCGGCC CCGCCGAGAC GATCAGCGCA GCCCAACGGC TCACCGCCTA TGCCACCGTC ACCGCCCACA GCGCCACCCG CGCCGAACTC GAACTCATCT TCCACACCAC CACCGAACCC GCGACCAGCA CGCCATTCAT CGACGTGATG AACCGCTGGA CACCACCCAC ACCACACACC CCACCCCTGA CCACCGACCA GCTCCGCGCG CTGATCGCGC GCCTCGCCGC CAACGGCCTC TGGCTCCACG AAACACTCAC CGGCACACCC ATGCCCGACC CGATGCGCCG ATACCTCGCC CAGCACATCG CCGACCTCGT CCCACACCCG CCAGCACAAC CAGCGAACCC AACCCCGGAA TGA
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Protein sequence | MRPSKRILIL DAALRVIERD GVTAVTYETV AEEAGITKAG LVYHFSTREA LLHAVQERLA TQWEAAMTNA AGGPAETISA AQRLTAYATV TAHSATRAEL ELIFHTTTEP ATSTPFIDVM NRWTPPTPHT PPLTTDQLRA LIARLAANGL WLHETLTGTP MPDPMRRYLA QHIADLVPHP PAQPANPTPE
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