Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2268 |
Symbol | |
ID | 5058731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2562508 |
End bp | 2563917 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640474530 |
Product | hypothetical protein |
Protein accession | YP_001159096 |
Protein GI | 145594799 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01319] conserved hypothetical protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00276621 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.111523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGTCG CGATCTGCGC GGATGTCGGC TCCACGTACA CGAAGGTGGC GGTGGTCGAT CTCGACGGCG CGGGTCTGGT TTCGACGGCG TCACTGCCCA CGACGGTGGG CAGTGACGTG TTGCGGGGGT TGGACGCGGC GGTCGCTGCC GCGACCGCCG GTCTGCCGGT GGGGGACGCG CCCTGGTACG TGTGTTCGTC TGCCGGGGGC GGGCTGCGGT TGGCGGTGGT CGGCTACGAA CAGTTGGTGA CCGCGCAGGC GGGCCGTCGG GTGGGCCTGT CGGCGGGGGC GAACGTGGTG TATGTGGCCG CGGGTCGGCT CGGCGCGGCG GAGTTGGCGG CGGTCCGGGC GGCCCGCCCG GATGTGCTGC TGCTGGTTGG CGGCACCGAC GGCGGTGACG CGGAGACGTT GACGCACAAC GCGACTCGGC TGGCGCGGGC CCGCTGGCGG GTTCCGGTGG TCCTCGCCGG GAACGCGGAG GTCCGCGACG ACCTGTTTTC GATGCTGGTG TCGGCGAAGG TGCCGGTGAC CGTGGCGGAG AATGTGCTGC CCCGGATCGG GGTGTTGGCG CCGGCTGGGG CGCGGGCGGC GATCCGGGAG GTGTTCCTGC GGCATGTGAT CGGCGGCAAG CGGCTGTCTC GGGGGCCGCG ATTCCCACGG CTGGTGCGGG CGGCGACTCC GGATGCGGTG CTGACCGGCG TGGAGTTACT TGCGGACACG CTCGGCGGTG ACCTGGCGGT GGTGGATGTC GGTGGGGCGA CCACCGACGT GTACTCGGTG TTGACGCCGG ATGAGCGGGA GAGTGGGCCG GGCCGGGAGG TGGCCGGCAG CCTGTGGCGG GCCCGTACCG TCGAGGGGGA CCTGGGGGTG CGGTGGAGTG CCCCGGGTGT GGTGCGGGCA GCGGTGGAGG AGCGGTTACT CGACGCGGCC GAGGCCGAGG TGTTGGCGGC GGCGGCACGG CGGCGTGCCG ACGACCCGGC GTACCTTCCG GCGGGTGGGG CCGAGCGGGC GACAGACGCG CGGTTGGCCG CCCTGGCGGC CACGGTGGCG CTGCGGCGGC ATGCCCGCGG GGCGGCCACC GGTGAACGCG CGGGACGGGA TCTGCGGGAT GTGCGGCTGC TGGTCGGTTC GGGTGGTGTG CTGCGGCACG CCGCGCCCGC CGACGCCGCC GGGGTGCTCG CCGGGGTGCT CGCCGACTAC GCCGGTGGGT GGCCGTTGCC GCGTGCCGCC CGGCCGGTGG TGGACGTGGA GTACGTGTTG GCCGCCGCCG GGTTGCTCGG GGCCGAGCAA CCGGCCGCGG CGCGTGCTCT CACCGCCCGG TTGCGGGGGG CTGGGCATGC CCCGGTTGCC CGATGTGTGG GTGGCGCGGT GCGGGCCGGC CGGCCCGAAT GCCGCGACAC GCCCGGGTAG
|
Protein sequence | MNVAICADVG STYTKVAVVD LDGAGLVSTA SLPTTVGSDV LRGLDAAVAA ATAGLPVGDA PWYVCSSAGG GLRLAVVGYE QLVTAQAGRR VGLSAGANVV YVAAGRLGAA ELAAVRAARP DVLLLVGGTD GGDAETLTHN ATRLARARWR VPVVLAGNAE VRDDLFSMLV SAKVPVTVAE NVLPRIGVLA PAGARAAIRE VFLRHVIGGK RLSRGPRFPR LVRAATPDAV LTGVELLADT LGGDLAVVDV GGATTDVYSV LTPDERESGP GREVAGSLWR ARTVEGDLGV RWSAPGVVRA AVEERLLDAA EAEVLAAAAR RRADDPAYLP AGGAERATDA RLAALAATVA LRRHARGAAT GERAGRDLRD VRLLVGSGGV LRHAAPADAA GVLAGVLADY AGGWPLPRAA RPVVDVEYVL AAAGLLGAEQ PAAARALTAR LRGAGHAPVA RCVGGAVRAG RPECRDTPG
|
| |