Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2229 |
Symbol | |
ID | 5058692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2521135 |
End bp | 2521617 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640474491 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001159057 |
Protein GI | 145594760 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCAGAATA CGTTTGTGCA TGCTCAGCAG CCGAACCCGG AGGCGAACGA CGCCCGATTC CGCCTGCGCC ATCTCGCGCG GCTGCGGCAG GTACGGGACC GTATCGACCG GGAGTATGCG CAGCCGCTGG ACGTGCAGGC GTTGGCCCGC GGGGTGAACA TGTCGGCCGG ACACCTCAGC CGTGAGTTCC GCCTCGCCTA CGGAGAGTCG CCGTACGCGT ACCTGCTGAC CCGGCGGGTG GAGCGGGCGA TGGCGTTGCT GCGCCGGGGC GACATGACCG TTACGGAGGT CTGCTTCGCG GTCGGATCCT CCTCGCTGGG TACGTTCAGT AGTCGGTTCA CCGAACTGGT GGGCGTGCCC CCCAGCACCT ACCGACGGAT GGCGTCGGAG GCGACGGCGG GGATGCCGTC GTGCGTGTCG AAGCAGGTGA CTCGGCCGGT GCGGAGCCGG CAGACGCGGG CGGGGGAGCG GCAACCGGCC TGA
|
Protein sequence | MQNTFVHAQQ PNPEANDARF RLRHLARLRQ VRDRIDREYA QPLDVQALAR GVNMSAGHLS REFRLAYGES PYAYLLTRRV ERAMALLRRG DMTVTEVCFA VGSSSLGTFS SRFTELVGVP PSTYRRMASE ATAGMPSCVS KQVTRPVRSR QTRAGERQPA
|
| |